RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.19	□□□□□ -1.74
CARS2-223	ENST00000540785	STAU1	O95793	577 aa	Known RBP	4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	MPST	P25325	297 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	XPC	Q01831	940 aa	Predicted RBP	4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	C16orf46	Q6P387	395 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	TMC7	Q7Z402	723 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	DRC1	Q96MC2	740 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	CYLD	Q9NQC7	956 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	TMPRSS4	Q9NRS4	437 aa		4.18	□□□□□ -1.74
CARS2-223	ENST00000540785	INHA	P05111	366 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	P4HB	P07237	508 aa	Known RBP	4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	NPR3	P17342	541 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	MAPK8	P45983	427 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	ERVK-9	P63128	1117 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	DHX9	Q08211	1270 aa	Known RBP	4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	TBCEL	Q5QJ74	424 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	ALKBH2	Q6NS38	261 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	EHBP1	Q8NDI1	1231 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	RBCK1	Q9BYM8	510 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	BACH2	Q9BYV9	841 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	SAP130	Q9H0E3	1048 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	OSBPL3	Q9H4L5	887 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785	CHMP3	Q9Y3E7	222 aa		4.17	□□□□□ -1.74
CARS2-223	ENST00000540785		A0A1W2PRU2	124 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	RECK	O95980	971 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	ERCC5	P28715	1186 aa	Predicted RBP	4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	EIF1AX	P47813	144 aa	Known RBP	4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	SCNN1D	P51172	638 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	ZC3H6	P61129	1189 aa	Known RBP	4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	FGD1	P98174	961 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	MYT1	Q01538	1121 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	TRIM32	Q13049	653 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	ESCO1	Q5FWF5	840 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	C9orf131	Q5VYM1	1079 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	SREK1	Q8WXA9	508 aa	Known RBP	4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	C8orf37	Q96NL8	207 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	CITED4	Q96RK1	184 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	ETNK1	Q9HBU6	452 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	MRS2	Q9HD23	443 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	CCDC87	Q9NVE4	849 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	STIM2	Q9P246	746 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785	MAP4K5	Q9Y4K4	846 aa		4.16	□□□□□ -1.74
CARS2-223	ENST00000540785		A6NJY4	79 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	GNRH1	P01148	92 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	LDHB	P07195	334 aa	Known RBP	4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	HMGB1	P09429	215 aa	Known RBP	4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	FSHR	P23945	695 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	GGCX	P38435	758 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	ITGAE	P38570	1179 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	WNT7B	P56706	349 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	SKOR1	P84550	965 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	NAALADL2	Q58DX5	795 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	COX20	Q5RI15	118 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	CYP2U1	Q7Z449	544 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	SLC9A9	Q8IVB4	645 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	TMEM87A	Q8NBN3	555 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	SLC4A9	Q96Q91	983 aa		4.15	□□□□□ -1.75
CARS2-223	ENST00000540785	POTEM	A6NI47	508 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	WASL	O00401	505 aa	Predicted RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	SCAMP3	O14828	347 aa	Known RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	TREH	O43280	583 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	CD2BP2	O95400	341 aa	Known RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	SMTN	P53814	917 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	ATP2B2	Q01814	1243 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	EHHADH	Q08426	723 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	PDE3B	Q13370	1112 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	RC3H1	Q5TC82	1133 aa	Known RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	ABTB2	Q8N961	1025 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	ZNF784	Q8NCA9	323 aa	Predicted RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	NGLY1	Q96IV0	654 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	DMRTB1	Q96MA1	342 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	FAM161B	Q96MY7	647 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	DUSP9	Q99956	384 aa	Known RBP	4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	PRKD2	Q9BZL6	878 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	RAB6B	Q9NRW1	208 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	PARP2	Q9UGN5	583 aa		4.14	□□□□□ -1.75
CARS2-223	ENST00000540785	RNF223	E7ERA6	249 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	FZD6	O60353	706 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	SORBS3	O60504	671 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	PRPF40A	O75400	957 aa	Known RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	BRD2	P25440	801 aa	Known RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	ADD1	P35611	737 aa	Known RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	GRM5	P41594	1212 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	EPHA4	P54764	986 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	PSMA6	P60900	246 aa	Known RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	KCNC4	Q03721	635 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	FMR1	Q06787	632 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	PSMD2	Q13200	908 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	SF3A1	Q15459	793 aa	Known RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	CCDC116	Q8IYX3	515 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	STAG2	Q8N3U4	1231 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	CDK15	Q96Q40	435 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	NIF3L1	Q9GZT8	377 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	PGPEP1	Q9NXJ5	209 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	VTI1B	Q9UEU0	232 aa		4.13	□□□□□ -1.75
CARS2-223	ENST00000540785	ZNF232	Q9UNY5	417 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms