RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 HSCBQ8IWL3 235 aa12.33□□□□□ -0.44
NUP85-203ENST00000540768 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
NUP85-203ENST00000540768 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
NUP85-203ENST00000540768 DDIT3P35638 169 aa12.32□□□□□ -0.44
NUP85-203ENST00000540768 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
NUP85-203ENST00000540768 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
NUP85-203ENST00000540768 BABAM1Q9NWV8 329 aa12.32□□□□□ -0.44
NUP85-203ENST00000540768 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
NUP85-203ENST00000540768 NFAT5O94916 1531 aa12.32□□□□□ -0.44
NUP85-203ENST00000540768 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
NUP85-203ENST00000540768 F6X3S4 739 aa12.31□□□□□ -0.44
NUP85-203ENST00000540768 RXRBP28702 533 aa12.31□□□□□ -0.44
NUP85-203ENST00000540768 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
NUP85-203ENST00000540768 AHDC1Q5TGY3 1603 aaPredicted RBP12.31□□□□□ -0.44
NUP85-203ENST00000540768 LTN1O94822 1766 aa12.31□□□□□ -0.44
NUP85-203ENST00000540768 ADGRL3Q9HAR2 1447 aa12.3□□□□□ -0.44
NUP85-203ENST00000540768 CCDC30Q5VVM6 783 aa12.3□□□□□ -0.44
NUP85-203ENST00000540768 OTUD7AQ8TE49 926 aaPredicted RBP12.3□□□□□ -0.44
NUP85-203ENST00000540768 IP6K1Q92551 441 aa12.3□□□□□ -0.44
NUP85-203ENST00000540768 LTV1Q96GA3 475 aaPredicted RBP12.3□□□□□ -0.44
NUP85-203ENST00000540768 ORAI2Q96SN7 254 aa12.3□□□□□ -0.44
NUP85-203ENST00000540768 STK31Q9BXU1 1019 aa12.3□□□□□ -0.44
NUP85-203ENST00000540768 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
NUP85-203ENST00000540768 SLC4A10Q6U841 1118 aa12.29□□□□□ -0.44
NUP85-203ENST00000540768 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
NUP85-203ENST00000540768 AFF2P51816 1311 aa12.29□□□□□ -0.44
NUP85-203ENST00000540768 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
NUP85-203ENST00000540768 FLIIQ13045 1269 aa12.29□□□□□ -0.44
NUP85-203ENST00000540768 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
NUP85-203ENST00000540768 HMMRO75330 724 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 MCM4P33991 863 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 CACNA1FO60840 1977 aa12.28□□□□□ -0.44
NUP85-203ENST00000540768 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
NUP85-203ENST00000540768 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.44
NUP85-203ENST00000540768 GNAI2P04899 355 aa12.27□□□□□ -0.44
NUP85-203ENST00000540768 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
NUP85-203ENST00000540768 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 SDSP20132 328 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 NBPF4Q96M43 638 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
NUP85-203ENST00000540768 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
NUP85-203ENST00000540768 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
NUP85-203ENST00000540768 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
NUP85-203ENST00000540768 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
NUP85-203ENST00000540768 PXDNLA1KZ92 1463 aa12.26□□□□□ -0.45
NUP85-203ENST00000540768 PSME1Q06323 249 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 ESCO1Q5FWF5 840 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
NUP85-203ENST00000540768 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
NUP85-203ENST00000540768 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 APBB1O00213 710 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 GNAI3P08754 354 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 ATP8B2P98198 1209 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
NUP85-203ENST00000540768 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
NUP85-203ENST00000540768 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
NUP85-203ENST00000540768 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
NUP85-203ENST00000540768 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
NUP85-203ENST00000540768 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
NUP85-203ENST00000540768 PDE1AP54750 535 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 LGR6Q9HBX8 967 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 SLIT3O75094 1523 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 KDM3BQ7LBC6 1761 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 NCAPD2Q15021 1401 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 LMO7Q8WWI1 1683 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
NUP85-203ENST00000540768 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
NUP85-203ENST00000540768 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
NUP85-203ENST00000540768 RABEP1Q15276 862 aa12.22□□□□□ -0.45
NUP85-203ENST00000540768 EXOC6BQ9Y2D4 811 aa12.22□□□□□ -0.45
NUP85-203ENST00000540768 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
NUP85-203ENST00000540768 HOXB7P09629 217 aa12.21□□□□□ -0.45
NUP85-203ENST00000540768 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
NUP85-203ENST00000540768 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
NUP85-203ENST00000540768 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
NUP85-203ENST00000540768 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
NUP85-203ENST00000540768 GCP02774 474 aa12.21□□□□□ -0.46
NUP85-203ENST00000540768 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.46
NUP85-203ENST00000540768 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.46
NUP85-203ENST00000540768 CASC1Q6TDU7 716 aa12.21□□□□□ -0.46
NUP85-203ENST00000540768 TNPO1Q92973 898 aaKnown RBP12.21□□□□□ -0.46
NUP85-203ENST00000540768 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.46
NUP85-203ENST00000540768 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.46
NUP85-203ENST00000540768 USP21Q9UK80 565 aa12.2□□□□□ -0.46
NUP85-203ENST00000540768 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
NUP85-203ENST00000540768 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
NUP85-203ENST00000540768 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
NUP85-203ENST00000540768 KCNQ3O43525 872 aa12.19□□□□□ -0.46
NUP85-203ENST00000540768 TRAK2O60296 914 aa12.19□□□□□ -0.46
NUP85-203ENST00000540768 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms