RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
NPC1-202ENST00000540608 GNAI2P04899 355 aa15.04■□□□□ -0
NPC1-202ENST00000540608 RTF1Q92541 710 aaKnown RBP15.04■□□□□ -0
NPC1-202ENST00000540608 EID1Q9Y6B2 187 aa15.04■□□□□ -0
NPC1-202ENST00000540608 F6X3S4 739 aa15.03■□□□□ -0
NPC1-202ENST00000540608 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
NPC1-202ENST00000540608 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
NPC1-202ENST00000540608 MCM2P49736 904 aa15.03■□□□□ -0
NPC1-202ENST00000540608 GPT2Q8TD30 523 aa15.02■□□□□ -0
NPC1-202ENST00000540608 SALL3Q9BXA9 1300 aa15.02■□□□□ -0
NPC1-202ENST00000540608 RGPD8O14715 1765 aaPredicted RBP15.02□□□□□ -0.01
NPC1-202ENST00000540608 HS1BP3Q53T59 392 aa15.02□□□□□ -0.01
NPC1-202ENST00000540608 TTC21AQ8NDW8 1320 aa15.02□□□□□ -0.01
NPC1-202ENST00000540608 FMN2Q9NZ56 1722 aa15.02□□□□□ -0.01
NPC1-202ENST00000540608 NEK4P51957 841 aa15.02□□□□□ -0.01
NPC1-202ENST00000540608 RBSNQ9H1K0 784 aa15.02□□□□□ -0.01
NPC1-202ENST00000540608 TMX3Q96JJ7 454 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 ESYT1Q9BSJ8 1104 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 FLT4P35916 1363 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 NGDNQ8NEJ9 315 aaKnown RBP15.01□□□□□ -0.01
NPC1-202ENST00000540608 LRRCC1Q9C099 1032 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 EXOC6BQ9Y2D4 811 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 SBNO1A3KN83 1393 aa15.01□□□□□ -0.01
NPC1-202ENST00000540608 PRIM1P49642 420 aaKnown RBP15□□□□□ -0.01
NPC1-202ENST00000540608 EYA1Q99502 592 aa15□□□□□ -0.01
NPC1-202ENST00000540608 STK31Q9BXU1 1019 aa15□□□□□ -0.01
NPC1-202ENST00000540608 SLIT1O75093 1534 aa15□□□□□ -0.01
NPC1-202ENST00000540608 DIP2AQ14689 1571 aa15□□□□□ -0.01
NPC1-202ENST00000540608 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
NPC1-202ENST00000540608 RRP9O43818 475 aaKnown RBP15□□□□□ -0.01
NPC1-202ENST00000540608 GNAI3P08754 354 aa15□□□□□ -0.01
NPC1-202ENST00000540608 KDRP35968 1356 aa15□□□□□ -0.01
NPC1-202ENST00000540608 ATP8B2P98198 1209 aa15□□□□□ -0.01
NPC1-202ENST00000540608 ARHGAP23Q9P227 1491 aa15□□□□□ -0.01
NPC1-202ENST00000540608 TBX22Q9Y458 520 aa15□□□□□ -0.01
NPC1-202ENST00000540608 TPM2P07951 284 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 MCCP23508 829 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 ANAPC15P60006 121 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 CUL4AQ13619 759 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 HTATSF1O43719 755 aaKnown RBP14.99□□□□□ -0.01
NPC1-202ENST00000540608 MX1P20591 662 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 AMPHP49418 695 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 PDLIM2Q96JY6 352 aa14.99□□□□□ -0.01
NPC1-202ENST00000540608 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
NPC1-202ENST00000540608 RBM27Q9P2N5 1060 aaKnown RBP14.98□□□□□ -0.01
NPC1-202ENST00000540608 STAP2Q9UGK3 403 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 PIK3C2AO00443 1686 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 IGSF1Q8N6C5 1336 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 CCDC30Q5VVM6 783 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 LRSAM1Q6UWE0 723 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 TUBGCP6Q96RT7 1819 aa14.98□□□□□ -0.01
NPC1-202ENST00000540608 OFD1O75665 1012 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 BRD1O95696 1058 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 CHMLP26374 656 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 FLIIQ13045 1269 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
NPC1-202ENST00000540608 TSHZ3Q63HK5 1081 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 INTS4Q96HW7 963 aaKnown RBP14.97□□□□□ -0.01
NPC1-202ENST00000540608 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 PNMA6EA0A0J9YXQ4 647 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
NPC1-202ENST00000540608 MBD3O95983 291 aa14.96□□□□□ -0.01
NPC1-202ENST00000540608 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
NPC1-202ENST00000540608 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
NPC1-202ENST00000540608 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
NPC1-202ENST00000540608 NLRP6P59044 892 aa14.96□□□□□ -0.02
NPC1-202ENST00000540608 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.02
NPC1-202ENST00000540608 CHAMP1Q96JM3 812 aa14.96□□□□□ -0.02
NPC1-202ENST00000540608 TRIM6-TRIM34B2RNG4 842 aa14.95□□□□□ -0.02
NPC1-202ENST00000540608 RILPL2Q969X0 211 aa14.95□□□□□ -0.02
NPC1-202ENST00000540608 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
NPC1-202ENST00000540608 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
NPC1-202ENST00000540608 ANO2Q9NQ90 1003 aa14.95□□□□□ -0.02
NPC1-202ENST00000540608 EPB41L2O43491 1005 aaKnown RBP14.94□□□□□ -0.02
NPC1-202ENST00000540608 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
NPC1-202ENST00000540608 AOX1Q06278 1338 aa14.94□□□□□ -0.02
NPC1-202ENST00000540608 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
NPC1-202ENST00000540608 SYCE3A1L190 88 aa14.94□□□□□ -0.02
NPC1-202ENST00000540608 FOXD4L5Q5VV16 416 aaPredicted RBP14.94□□□□□ -0.02
NPC1-202ENST00000540608 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.94□□□□□ -0.02
NPC1-202ENST00000540608 FOXD4L4Q8WXT5 416 aaPredicted RBP14.94□□□□□ -0.02
NPC1-202ENST00000540608 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
NPC1-202ENST00000540608 ZNF500O60304 480 aaPredicted RBP14.93□□□□□ -0.02
NPC1-202ENST00000540608 KCNA6P17658 529 aa14.93□□□□□ -0.02
NPC1-202ENST00000540608 HOXC9P31274 260 aa14.93□□□□□ -0.02
NPC1-202ENST00000540608 TERF1P54274 439 aa14.93□□□□□ -0.02
NPC1-202ENST00000540608 THEMISQ8N1K5 641 aaPredicted RBP14.93□□□□□ -0.02
NPC1-202ENST00000540608 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
NPC1-202ENST00000540608 GLIPR1L2Q4G1C9 344 aa14.92□□□□□ -0.02
NPC1-202ENST00000540608 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
NPC1-202ENST00000540608 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
NPC1-202ENST00000540608 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
NPC1-202ENST00000540608 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.92□□□□□ -0.02
NPC1-202ENST00000540608 MARF1Q9Y4F3 1742 aaKnown RBP14.92□□□□□ -0.02
NPC1-202ENST00000540608 FAM208AQ9UK61 1670 aaKnown RBP14.92□□□□□ -0.02
NPC1-202ENST00000540608 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
NPC1-202ENST00000540608 CACNA1FO60840 1977 aa14.91□□□□□ -0.02
NPC1-202ENST00000540608 NWD1Q149M9 1564 aa14.91□□□□□ -0.02
NPC1-202ENST00000540608 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms