RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
DDB1-217ENST00000540166 ZBTB7AO95365 584 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 CBX1P83916 185 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
DDB1-217ENST00000540166 NINLQ9Y2I6 1382 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 CABP4P57796 275 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 SASS6Q6UVJ0 657 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 CCDC39Q9UFE4 941 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 CCNL1Q9UK58 526 aaPredicted RBP10.63□□□□□ -0.71
DDB1-217ENST00000540166 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
DDB1-217ENST00000540166 RGS12O14924 1447 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 TNPO1Q92973 898 aaKnown RBP10.63□□□□□ -0.71
DDB1-217ENST00000540166 ANTXR1Q9H6X2 564 aa10.63□□□□□ -0.71
DDB1-217ENST00000540166 PRIM1P49642 420 aaKnown RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 TEFQ10587 303 aa10.62□□□□□ -0.71
DDB1-217ENST00000540166 PDIA4P13667 645 aaKnown RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 CAVIN1Q6NZI2 390 aaKnown RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 USP6P35125 1406 aa10.62□□□□□ -0.71
DDB1-217ENST00000540166 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
DDB1-217ENST00000540166 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
DDB1-217ENST00000540166 SMC4Q9NTJ3 1288 aa10.62□□□□□ -0.71
DDB1-217ENST00000540166 PHF14O94880 888 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 PUS7Q96PZ0 661 aaKnown RBP10.61□□□□□ -0.71
DDB1-217ENST00000540166 ATP7BP35670 1465 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 FBLN1P23142 703 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 LAMC1P11047 1609 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
DDB1-217ENST00000540166 MCTP1Q6DN14 999 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 DLC1Q96QB1 1528 aa10.61□□□□□ -0.71
DDB1-217ENST00000540166 CRB1P82279 1406 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 HMGN5P82970 282 aaKnown RBP10.6□□□□□ -0.71
DDB1-217ENST00000540166 TXNRD1Q16881 649 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 AATKQ6ZMQ8 1374 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 SSH2Q76I76 1423 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 CCDC94Q9BW85 323 aaPredicted RBP10.6□□□□□ -0.71
DDB1-217ENST00000540166 ATRNO75882 1429 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 MTHFSP49914 203 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 RUNDC1Q96C34 613 aa10.6□□□□□ -0.71
DDB1-217ENST00000540166 MAP3K19Q56UN5 1328 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 COL16A1Q07092 1604 aaPredicted RBP10.59□□□□□ -0.71
DDB1-217ENST00000540166 ZKSCAN2Q63HK3 967 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 PRDM4Q9UKN5 801 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 PPLO60437 1756 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 HOXC9P31274 260 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 IFNL2Q8IZJ0 200 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
DDB1-217ENST00000540166 NAP1L2Q9ULW6 460 aaPredicted RBP10.59□□□□□ -0.71
DDB1-217ENST00000540166 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 OVOS2A0A0G2JMS6 1433 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 OVOS2A0A0J9YW53 1432 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 OVOS2Q6IE36 1432 aa10.59□□□□□ -0.71
DDB1-217ENST00000540166 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
DDB1-217ENST00000540166 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
DDB1-217ENST00000540166 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
DDB1-217ENST00000540166 PXDNQ92626 1479 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 EDC4Q6P2E9 1401 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 FYB1O15117 783 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 RIPK4P57078 832 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 RNF214Q8ND24 703 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 GTPBP4Q9BZE4 634 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 AXIN2Q9Y2T1 843 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 CDK12Q9NYV4 1490 aaPredicted RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 BCL9LQ86UU0 1499 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 LETM1O95202 739 aaPredicted RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
DDB1-217ENST00000540166 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 USP19O94966 1318 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 ERBB3P21860 1342 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
DDB1-217ENST00000540166 KIF20AO95235 890 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
DDB1-217ENST00000540166 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 KCNQ2O43526 872 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 HS1BP3Q53T59 392 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
DDB1-217ENST00000540166 MCM5P33992 734 aa10.56□□□□□ -0.72
DDB1-217ENST00000540166 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
DDB1-217ENST00000540166 NUCB2P80303 420 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 HMOX1P09601 288 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 RFC4P35249 363 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
DDB1-217ENST00000540166 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms