RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
LPCAT3-209ENST00000540060 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
LPCAT3-209ENST00000540060 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
LPCAT3-209ENST00000540060 FAM196AQ6ZSG2 479 aa9.35□□□□□ -0.91
LPCAT3-209ENST00000540060 FOXD4L1Q9NU39 408 aa9.35□□□□□ -0.91
LPCAT3-209ENST00000540060 MRC1P22897 1456 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 CYP27B1O15528 508 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 ANP32CO43423 234 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 NUDCQ9Y266 331 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 KAT6BQ8WYB5 2073 aa9.34□□□□□ -0.91
LPCAT3-209ENST00000540060 UBR2Q8IWV8 1755 aa9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 U2AF1L5P0DN76 240 aaPredicted RBP9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 PHKG2P15735 406 aa9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 U2AF1Q01081 240 aaKnown RBP eCLIP9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 CICQ96RK0 1608 aaPredicted RBP9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
LPCAT3-209ENST00000540060 C5P01031 1676 aa9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 TRIM37O94972 964 aa9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 PLEKHO1Q53GL0 409 aaPredicted RBP9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
LPCAT3-209ENST00000540060 FCHSD2O94868 740 aa9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 C7P10643 843 aa9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 CCDC184Q52MB2 194 aa9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 ZNF530Q6P9A1 599 aaPredicted RBP9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 PTF1AQ7RTS3 328 aa9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 IFNL2Q8IZJ0 200 aa9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 COL5A3P25940 1745 aaPredicted RBP9.31□□□□□ -0.92
LPCAT3-209ENST00000540060 KDM3BQ7LBC6 1761 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 MAP3K5Q99683 1374 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 KCNQ2O43526 872 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 MTHFSDQ2M296 383 aaKnown RBP9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 ACSBG1Q96GR2 724 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 PLEKHF1Q96S99 279 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 BCL11BQ9C0K0 894 aaPredicted RBP9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
LPCAT3-209ENST00000540060 TJP1Q07157 1748 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 C1orf141Q5JVX7 400 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
LPCAT3-209ENST00000540060 HSP90AB1P08238 724 aaKnown RBP9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 BAG6P46379 1132 aa9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 DCAF5Q96JK2 942 aa9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
LPCAT3-209ENST00000540060 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 APBA3O96018 575 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 DIEXFQ68CQ4 756 aaKnown RBP9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 DEFB132Q7Z7B7 95 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 SYTL4Q96C24 671 aaPredicted RBP9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 MAPK8IP3Q9UPT6 1336 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 LAMB4A4D0S4 1761 aa9.27□□□□□ -0.93
LPCAT3-209ENST00000540060 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 PLSCR1O15162 318 aa9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 CAMKK2Q96RR4 588 aa9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
LPCAT3-209ENST00000540060 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 GNAT3A8MTJ3 354 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 NEFMP07197 916 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 CCDC146Q8IYE0 955 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 PNISRQ8TF01 805 aaKnown RBP9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 UBR3Q6ZT12 1888 aa9.25□□□□□ -0.93
LPCAT3-209ENST00000540060 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 CASZ1Q86V15 1759 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 NFE2L2Q16236 605 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 PIGBQ92521 554 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 RUNDC1Q96C34 613 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 SLC52A2Q9HAB3 445 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
LPCAT3-209ENST00000540060 CABP4P57796 275 aa9.23□□□□□ -0.93
LPCAT3-209ENST00000540060 IL17REQ8NFR9 667 aa9.23□□□□□ -0.93
LPCAT3-209ENST00000540060 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 CCER2I3L3R5 266 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 HTATSF1O43719 755 aaKnown RBP9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 TMPOP42166 694 aaKnown RBP9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 TXNRD1Q16881 649 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 MCM10Q7L590 875 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 PROM2Q8N271 834 aa9.22□□□□□ -0.93
LPCAT3-209ENST00000540060 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms