RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 SYNMO15061 1565 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 PLXNC1O60486 1568 aa6.59□□□□□ -1.35
C2CD3-214ENST00000540057 CLIP1P30622 1438 aa6.59□□□□□ -1.36
C2CD3-214ENST00000540057 DEPDC5O75140 1603 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 PLEKHG3A1L390 1219 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 SH3D19Q5HYK7 790 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 SH3BP5LQ7L8J4 393 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
C2CD3-214ENST00000540057 FAM117AQ9C073 453 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 RSPH6AQ9H0K4 717 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 A2MP01023 1474 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
C2CD3-214ENST00000540057 TNRQ92752 1358 aa6.57□□□□□ -1.36
C2CD3-214ENST00000540057 SPAG9O60271 1321 aaKnown RBP6.57□□□□□ -1.36
C2CD3-214ENST00000540057 LRRIQ1Q96JM4 1722 aa6.57□□□□□ -1.36
C2CD3-214ENST00000540057 BCANQ96GW7 911 aa6.57□□□□□ -1.36
C2CD3-214ENST00000540057 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.57□□□□□ -1.36
C2CD3-214ENST00000540057 XIRP1Q702N8 1843 aaKnown RBP6.57□□□□□ -1.36
C2CD3-214ENST00000540057 CDC42BPAQ5VT25 1732 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 ATP7AQ04656 1500 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 NR3C2P08235 984 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 GRM5P41594 1212 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 WDR4P57081 412 aaKnown RBP6.56□□□□□ -1.36
C2CD3-214ENST00000540057 CTDSPL2Q05D32 466 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 BPHLQ86WA6 291 aaPredicted RBP6.56□□□□□ -1.36
C2CD3-214ENST00000540057 THEMISQ8N1K5 641 aaPredicted RBP6.56□□□□□ -1.36
C2CD3-214ENST00000540057 FAM135BQ49AJ0 1406 aa6.56□□□□□ -1.36
C2CD3-214ENST00000540057 TERTO14746 1132 aaKnown RBP6.55□□□□□ -1.36
C2CD3-214ENST00000540057 HNRNPMP52272 730 aaKnown RBP eCLIP6.55□□□□□ -1.36
C2CD3-214ENST00000540057 SKIV2LQ15477 1246 aaKnown RBP6.55□□□□□ -1.36
C2CD3-214ENST00000540057 PROCA1Q8NCQ7 364 aaPredicted RBP6.55□□□□□ -1.36
C2CD3-214ENST00000540057 ARMC2Q8NEN0 867 aa6.55□□□□□ -1.36
C2CD3-214ENST00000540057 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
C2CD3-214ENST00000540057 FMN1Q68DA7 1419 aa6.55□□□□□ -1.36
C2CD3-214ENST00000540057 UGGT1Q9NYU2 1555 aa6.55□□□□□ -1.36
C2CD3-214ENST00000540057 INO80Q9ULG1 1556 aaPredicted RBP6.55□□□□□ -1.36
C2CD3-214ENST00000540057 SYCP2Q9BX26 1530 aa6.55□□□□□ -1.36
C2CD3-214ENST00000540057 WIPF1O43516 503 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 ARID5BQ14865 1188 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 NBPF14Q5TI25 921 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 MRPL14Q6P1L8 145 aaKnown RBP6.54□□□□□ -1.36
C2CD3-214ENST00000540057 TRMT44Q8IYL2 757 aaKnown RBP6.54□□□□□ -1.36
C2CD3-214ENST00000540057 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 DDRGK1Q96HY6 314 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 ZFAND3Q9H8U3 227 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 ZNF777Q9ULD5 760 aaPredicted RBP6.54□□□□□ -1.36
C2CD3-214ENST00000540057 ZC3H13Q5T200 1668 aaKnown RBP6.54□□□□□ -1.36
C2CD3-214ENST00000540057 FAM135AQ9P2D6 1515 aa6.54□□□□□ -1.36
C2CD3-214ENST00000540057 PZPP20742 1482 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 NLRP1Q9C000 1473 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 MIA2Q96PC5 1412 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 SLC24A1O60721 1099 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 NR5A1Q13285 461 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 AGERQ15109 404 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 TRIM52Q96A61 297 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 ITPKCQ96DU7 683 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 MAP4K5Q9Y4K4 846 aa6.53□□□□□ -1.36
C2CD3-214ENST00000540057 ADGBQ8N7X0 1667 aa6.52□□□□□ -1.37
C2CD3-214ENST00000540057 ROBO1Q9Y6N7 1651 aa6.52□□□□□ -1.37
C2CD3-214ENST00000540057 SRCAPQ6ZRS2 3230 aa6.52□□□□□ -1.37
C2CD3-214ENST00000540057 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
C2CD3-214ENST00000540057 GPKOWQ92917 476 aaPredicted RBP eCLIP6.52□□□□□ -1.37
C2CD3-214ENST00000540057 FSHRP23945 695 aa6.51□□□□□ -1.37
C2CD3-214ENST00000540057 ERFEQ4G0M1 354 aa6.51□□□□□ -1.37
C2CD3-214ENST00000540057 PURBQ96QR8 312 aaKnown RBP6.51□□□□□ -1.37
C2CD3-214ENST00000540057 ARHGAP35Q9NRY4 1499 aa6.51□□□□□ -1.37
C2CD3-214ENST00000540057 KIAA1107Q9UPP5 1409 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 GPATCH8Q9UKJ3 1502 aaKnown RBP6.5□□□□□ -1.37
C2CD3-214ENST00000540057 MAGEB6P1A0A0J9YX57 407 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 MEIOBQ8N635 442 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 OCSTAMPQ9BR26 566 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 CARD14Q9BXL6 1004 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 NXF1Q9UBU9 619 aaKnown RBP6.5□□□□□ -1.37
C2CD3-214ENST00000540057 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 PHLPP1O60346 1717 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 LRP6O75581 1613 aa6.5□□□□□ -1.37
C2CD3-214ENST00000540057 DHX29Q7Z478 1369 aaKnown RBP6.49□□□□□ -1.37
C2CD3-214ENST00000540057 JCADQ9P266 1359 aa6.49□□□□□ -1.37
C2CD3-214ENST00000540057 SOBPA7XYQ1 873 aa6.49□□□□□ -1.37
C2CD3-214ENST00000540057 NR6A1Q15406 480 aa6.49□□□□□ -1.37
C2CD3-214ENST00000540057 ZNF772Q68DY9 489 aaPredicted RBP6.49□□□□□ -1.37
C2CD3-214ENST00000540057 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
C2CD3-214ENST00000540057 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 TMEM94Q12767 1356 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 KIF3BO15066 747 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 RXRBP28702 533 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 SCARF1Q14162 830 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 PDXDC2PQ6P474 469 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
C2CD3-214ENST00000540057 NPAS3Q8IXF0 933 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 EPS8L1Q8TE68 723 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 MAP3K1Q13233 1512 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 EEA1Q15075 1411 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 ZC3H4Q9UPT8 1303 aaKnown RBP6.48□□□□□ -1.37
C2CD3-214ENST00000540057 WASHC2CQ9Y4E1 1318 aa6.48□□□□□ -1.37
C2CD3-214ENST00000540057 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
C2CD3-214ENST00000540057 CDK12Q9NYV4 1490 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms