RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
RFX4-206ENST00000539967 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
RFX4-206ENST00000539967 ABCB7O75027 752 aa17.21■□□□□ 0.35
RFX4-206ENST00000539967 NEFMP07197 916 aa17.21■□□□□ 0.35
RFX4-206ENST00000539967 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
RFX4-206ENST00000539967 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
RFX4-206ENST00000539967 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
RFX4-206ENST00000539967 KCNQ3O43525 872 aa17.19■□□□□ 0.34
RFX4-206ENST00000539967 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
RFX4-206ENST00000539967 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
RFX4-206ENST00000539967 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
RFX4-206ENST00000539967 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
RFX4-206ENST00000539967 TRIM37O94972 964 aa17.17■□□□□ 0.34
RFX4-206ENST00000539967 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
RFX4-206ENST00000539967 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
RFX4-206ENST00000539967 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
RFX4-206ENST00000539967 EP400Q96L91 3159 aa17.17■□□□□ 0.34
RFX4-206ENST00000539967 BTAF1O14981 1849 aa17.17■□□□□ 0.34
RFX4-206ENST00000539967 PIGBQ92521 554 aa17.16■□□□□ 0.34
RFX4-206ENST00000539967 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
RFX4-206ENST00000539967 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
RFX4-206ENST00000539967 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
RFX4-206ENST00000539967 CABP4P57796 275 aa17.14■□□□□ 0.33
RFX4-206ENST00000539967 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
RFX4-206ENST00000539967 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
RFX4-206ENST00000539967 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
RFX4-206ENST00000539967 KCNQ4P56696 695 aa17.13■□□□□ 0.33
RFX4-206ENST00000539967 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
RFX4-206ENST00000539967 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
RFX4-206ENST00000539967 SLC52A2Q9HAB3 445 aa17.13■□□□□ 0.33
RFX4-206ENST00000539967 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
RFX4-206ENST00000539967 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
RFX4-206ENST00000539967 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
RFX4-206ENST00000539967 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
RFX4-206ENST00000539967 MRC1P22897 1456 aa17.11■□□□□ 0.33
RFX4-206ENST00000539967 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
RFX4-206ENST00000539967 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
RFX4-206ENST00000539967 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
RFX4-206ENST00000539967 TEFQ10587 303 aa17.1■□□□□ 0.33
RFX4-206ENST00000539967 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
RFX4-206ENST00000539967 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
RFX4-206ENST00000539967 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
RFX4-206ENST00000539967 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
RFX4-206ENST00000539967 BCL9O00512 1426 aa17.09■□□□□ 0.33
RFX4-206ENST00000539967 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 POLA2Q14181 598 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
RFX4-206ENST00000539967 MBIPQ9NS73 344 aa17.08■□□□□ 0.32
RFX4-206ENST00000539967 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
RFX4-206ENST00000539967 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
RFX4-206ENST00000539967 CHL1O00533 1208 aa17.06■□□□□ 0.32
RFX4-206ENST00000539967 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
RFX4-206ENST00000539967 C5P01031 1676 aa17.06■□□□□ 0.32
RFX4-206ENST00000539967 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
RFX4-206ENST00000539967 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
RFX4-206ENST00000539967 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
RFX4-206ENST00000539967 DEFB132Q7Z7B7 95 aa17.05■□□□□ 0.32
RFX4-206ENST00000539967 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
RFX4-206ENST00000539967 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
RFX4-206ENST00000539967 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
RFX4-206ENST00000539967 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
RFX4-206ENST00000539967 APBA3O96018 575 aa17.04■□□□□ 0.32
RFX4-206ENST00000539967 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
RFX4-206ENST00000539967 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
RFX4-206ENST00000539967 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
RFX4-206ENST00000539967 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 PROM2Q8N271 834 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
RFX4-206ENST00000539967 LY75O60449 1722 aa17.02■□□□□ 0.32
RFX4-206ENST00000539967 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
RFX4-206ENST00000539967 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
RFX4-206ENST00000539967 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
RFX4-206ENST00000539967 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
RFX4-206ENST00000539967 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
RFX4-206ENST00000539967 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
RFX4-206ENST00000539967 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
RFX4-206ENST00000539967 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
RFX4-206ENST00000539967 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
RFX4-206ENST00000539967 TJP1Q07157 1748 aa17.01■□□□□ 0.31
RFX4-206ENST00000539967 PALLDQ8WX93 1383 aa17.01■□□□□ 0.31
RFX4-206ENST00000539967 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
RFX4-206ENST00000539967 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
RFX4-206ENST00000539967 GNAI1P63096 354 aa17■□□□□ 0.31
RFX4-206ENST00000539967 ITPK1Q13572 414 aa17■□□□□ 0.31
RFX4-206ENST00000539967 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
RFX4-206ENST00000539967 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
RFX4-206ENST00000539967 LRRC4BQ9NT99 713 aa17■□□□□ 0.31
RFX4-206ENST00000539967 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
RFX4-206ENST00000539967 IL16Q14005 1332 aa16.99■□□□□ 0.31
RFX4-206ENST00000539967 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
RFX4-206ENST00000539967 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
RFX4-206ENST00000539967 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
RFX4-206ENST00000539967 SIK1P57059 783 aa16.97■□□□□ 0.31
RFX4-206ENST00000539967 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms