RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 BCS1LQ9Y276 419 aa8.32□□□□□ -1.08
CPSF7-219ENST00000539952 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
CPSF7-219ENST00000539952 LOC102724428A0A0B4J2F2 783 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 FYB1O15117 783 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 CYP27B1O15528 508 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 SIK1P57059 783 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 TMF1P82094 1093 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 USHBP1Q8N6Y0 703 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 PIGBQ92521 554 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 SPG7Q9UQ90 795 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
CPSF7-219ENST00000539952 LY75O60449 1722 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 FCHSD2O94868 740 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 MMP10P09238 476 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 RRS1Q15050 365 aaKnown RBP8.3□□□□□ -1.08
CPSF7-219ENST00000539952 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 COL13A1Q5TAT6 717 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-219ENST00000539952 MIER1Q8N108 512 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-219ENST00000539952 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.084e-9■■■□□ 15.2
CPSF7-219ENST00000539952 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
CPSF7-219ENST00000539952 RTL1A6NKG5 1358 aa8.3□□□□□ -1.08
CPSF7-219ENST00000539952 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
CPSF7-219ENST00000539952 GNPATO15228 680 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
CPSF7-219ENST00000539952 AMIGO3Q86WK7 504 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 TNS4Q8IZW8 715 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 MEGF6O75095 1541 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
CPSF7-219ENST00000539952 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 GOLGB1Q14789 3259 aaKnown RBP8.28□□□□□ -1.08
CPSF7-219ENST00000539952 INSRP06213 1382 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 DPEP1P16444 411 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 GGNBP2Q9H3C7 697 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 PARP3Q9Y6F1 533 aa8.28□□□□□ -1.08
CPSF7-219ENST00000539952 LTN1O94822 1766 aa8.27□□□□□ -1.08
CPSF7-219ENST00000539952 MON2Q7Z3U7 1717 aa8.27□□□□□ -1.09
CPSF7-219ENST00000539952 RFC4P35249 363 aa8.27□□□□□ -1.09
CPSF7-219ENST00000539952 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
CPSF7-219ENST00000539952 RRAGCQ9HB90 399 aa8.27□□□□□ -1.09
CPSF7-219ENST00000539952 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
CPSF7-219ENST00000539952 ST20-MTHFSA0A0A6YYL1 179 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 KCNA3P22001 575 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 ITPK1Q13572 414 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 DALRD3Q5D0E6 543 aaKnown RBP8.26□□□□□ -1.09
CPSF7-219ENST00000539952 SMC1BQ8NDV3 1235 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 TESK2Q96S53 571 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 FAM208AQ9UK61 1670 aaKnown RBP8.26□□□□□ -1.09
CPSF7-219ENST00000539952 TUBGCP6Q96RT7 1819 aa8.26□□□□□ -1.09
CPSF7-219ENST00000539952 FLT4P35916 1363 aa8.25□□□□□ -1.09
CPSF7-219ENST00000539952 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
CPSF7-219ENST00000539952 GYS1P13807 737 aa8.25□□□□□ -1.09
CPSF7-219ENST00000539952 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
CPSF7-219ENST00000539952 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
CPSF7-219ENST00000539952 PLEKHG2Q9H7P9 1386 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 DOT1LQ8TEK3 1739 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
CPSF7-219ENST00000539952 PHKG2P15735 406 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 HTRA3P83110 453 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 DCAF5Q96JK2 942 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
CPSF7-219ENST00000539952 PPM1GO15355 546 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-219ENST00000539952 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-219ENST00000539952 EYA1Q99502 592 aa8.23□□□□□ -1.09
CPSF7-219ENST00000539952 PXDNLA1KZ92 1463 aa8.23□□□□□ -1.09
CPSF7-219ENST00000539952 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
CPSF7-219ENST00000539952 ZC3H4Q9UPT8 1303 aaKnown RBP8.23□□□□□ -1.09
CPSF7-219ENST00000539952 C4BP0C0L5 1744 aa8.23□□□□□ -1.09
CPSF7-219ENST00000539952 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
CPSF7-219ENST00000539952 C5P01031 1676 aa8.22□□□□□ -1.09
CPSF7-219ENST00000539952 SPDYE1Q8NFV5 336 aaPredicted RBP8.22□□□□□ -1.09
CPSF7-219ENST00000539952 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
CPSF7-219ENST00000539952 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
CPSF7-219ENST00000539952 CNTNAP4Q9C0A0 1308 aa8.22□□□□□ -1.09
CPSF7-219ENST00000539952 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
CPSF7-219ENST00000539952 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-219ENST00000539952 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
CPSF7-219ENST00000539952 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
CPSF7-219ENST00000539952 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
CPSF7-219ENST00000539952 TAF1LQ8IZX4 1826 aa8.21□□□□□ -1.1
CPSF7-219ENST00000539952 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
CPSF7-219ENST00000539952 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
CPSF7-219ENST00000539952 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms