RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
VTN-202ENST00000539746 DLG5Q8TDM6 1919 aa15.06■□□□□ 0
VTN-202ENST00000539746 RARSP54136 660 aaKnown RBP15.06■□□□□ 0
VTN-202ENST00000539746 FTSJ3Q8IY81 847 aaKnown RBP15.06■□□□□ 0
VTN-202ENST00000539746 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
VTN-202ENST00000539746 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
VTN-202ENST00000539746 MRC1P22897 1456 aa15.06■□□□□ 0
VTN-202ENST00000539746 LRP6O75581 1613 aa15.06■□□□□ 0
VTN-202ENST00000539746 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
VTN-202ENST00000539746 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
VTN-202ENST00000539746 FMNL2Q96PY5 1086 aa15.05■□□□□ -0
VTN-202ENST00000539746 API5Q9BZZ5 524 aaKnown RBP15.05■□□□□ -0
VTN-202ENST00000539746 PTPRCP08575 1304 aa15.05■□□□□ -0
VTN-202ENST00000539746 AFF2P51816 1311 aa15.05■□□□□ -0
VTN-202ENST00000539746 RGPD2P0DJD1 1756 aa15.04■□□□□ -0
VTN-202ENST00000539746 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
VTN-202ENST00000539746 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
VTN-202ENST00000539746 A0A0G2JS52 829 aa15.04■□□□□ -0
VTN-202ENST00000539746 CYP27B1O15528 508 aa15.04■□□□□ -0
VTN-202ENST00000539746 MYT1Q01538 1121 aa15.04■□□□□ -0
VTN-202ENST00000539746 DCTN1Q14203 1278 aa15.04■□□□□ -0
VTN-202ENST00000539746 ERBB4Q15303 1308 aa15.03■□□□□ -0
VTN-202ENST00000539746 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
VTN-202ENST00000539746 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
VTN-202ENST00000539746 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
VTN-202ENST00000539746 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
VTN-202ENST00000539746 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
VTN-202ENST00000539746 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
VTN-202ENST00000539746 ZNF790Q6PG37 636 aa15.02■□□□□ -0
VTN-202ENST00000539746 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
VTN-202ENST00000539746 VAMP4O75379 141 aa15.01□□□□□ -0.01
VTN-202ENST00000539746 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
VTN-202ENST00000539746 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
VTN-202ENST00000539746 ATRNO75882 1429 aa15□□□□□ -0.01
VTN-202ENST00000539746 DDX58O95786 925 aaKnown RBP15□□□□□ -0.01
VTN-202ENST00000539746 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
VTN-202ENST00000539746 NPM2Q86SE8 214 aaKnown RBP15□□□□□ -0.01
VTN-202ENST00000539746 LGR6Q9HBX8 967 aa15□□□□□ -0.01
VTN-202ENST00000539746 DBF4Q9UBU7 674 aaPredicted RBP15□□□□□ -0.01
VTN-202ENST00000539746 BCL9O00512 1426 aa15□□□□□ -0.01
VTN-202ENST00000539746 WNK3Q9BYP7 1800 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 SCN11AQ9UI33 1791 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
VTN-202ENST00000539746 FKBP8Q14318 412 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 NFATC2IPQ8NCF5 419 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
VTN-202ENST00000539746 HYPKQ9NX55 129 aa14.99□□□□□ -0.01
VTN-202ENST00000539746 KDM6AO15550 1401 aaPredicted RBP14.99□□□□□ -0.01
VTN-202ENST00000539746 ONECUT3O60422 494 aaPredicted RBP14.98□□□□□ -0.01
VTN-202ENST00000539746 RBM6P78332 1123 aaKnown RBP14.98□□□□□ -0.01
VTN-202ENST00000539746 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
VTN-202ENST00000539746 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
VTN-202ENST00000539746 QTRT2Q9H974 415 aaKnown RBP14.98□□□□□ -0.01
VTN-202ENST00000539746 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
VTN-202ENST00000539746 STARD3NLO95772 234 aa14.97□□□□□ -0.01
VTN-202ENST00000539746 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
VTN-202ENST00000539746 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
VTN-202ENST00000539746 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
VTN-202ENST00000539746 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
VTN-202ENST00000539746 KDM3BQ7LBC6 1761 aa14.94□□□□□ -0.02
VTN-202ENST00000539746 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
VTN-202ENST00000539746 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
VTN-202ENST00000539746 ELL2O00472 640 aaPredicted RBP14.93□□□□□ -0.02
VTN-202ENST00000539746 BCAR3O75815 825 aa14.93□□□□□ -0.02
VTN-202ENST00000539746 FAM196AQ6ZSG2 479 aa14.93□□□□□ -0.02
VTN-202ENST00000539746 MRPL50Q8N5N7 158 aaKnown RBP14.93□□□□□ -0.02
VTN-202ENST00000539746 HEG1Q9ULI3 1381 aa14.93□□□□□ -0.02
VTN-202ENST00000539746 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
VTN-202ENST00000539746 DDX21Q9NR30 783 aaKnown RBP eCLIP14.92□□□□□ -0.02
VTN-202ENST00000539746 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
VTN-202ENST00000539746 NOB1Q9ULX3 412 aaKnown RBP14.92□□□□□ -0.02
VTN-202ENST00000539746 SIPA1L3O60292 1781 aaPredicted RBP14.92□□□□□ -0.02
VTN-202ENST00000539746 THSD7AQ9UPZ6 1657 aa14.91□□□□□ -0.02
VTN-202ENST00000539746 RXRBP28702 533 aa14.91□□□□□ -0.02
VTN-202ENST00000539746 NEXNQ0ZGT2 675 aa14.91□□□□□ -0.02
VTN-202ENST00000539746 CACNA1FO60840 1977 aa14.91□□□□□ -0.02
VTN-202ENST00000539746 PXDNLA1KZ92 1463 aa14.9□□□□□ -0.02
VTN-202ENST00000539746 FKBP5Q13451 457 aaPredicted RBP14.9□□□□□ -0.02
VTN-202ENST00000539746 MVPQ14764 893 aaKnown RBP14.9□□□□□ -0.02
VTN-202ENST00000539746 SEPT12Q8IYM1 358 aa14.9□□□□□ -0.02
VTN-202ENST00000539746 TSPYL6Q8N831 410 aa14.9□□□□□ -0.02
VTN-202ENST00000539746 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
VTN-202ENST00000539746 IBTKQ9P2D0 1353 aaPredicted RBP14.89□□□□□ -0.03
VTN-202ENST00000539746 EIF2S2P20042 333 aaKnown RBP14.89□□□□□ -0.03
VTN-202ENST00000539746 FLIIQ13045 1269 aa14.89□□□□□ -0.03
VTN-202ENST00000539746 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
VTN-202ENST00000539746 MARCH10Q8NA82 808 aaPredicted RBP14.89□□□□□ -0.03
VTN-202ENST00000539746 TRIM27P14373 513 aa14.88□□□□□ -0.03
VTN-202ENST00000539746 PRIM1P49642 420 aaKnown RBP14.88□□□□□ -0.03
VTN-202ENST00000539746 KRT27Q7Z3Y8 459 aa14.88□□□□□ -0.03
VTN-202ENST00000539746 PIGBQ92521 554 aa14.88□□□□□ -0.03
VTN-202ENST00000539746 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
VTN-202ENST00000539746 BCL2L13Q9BXK5 485 aa14.88□□□□□ -0.03
VTN-202ENST00000539746 SHANK3Q9BYB0 1731 aa14.88□□□□□ -0.03
VTN-202ENST00000539746 RGS12O14924 1447 aa14.87□□□□□ -0.03
VTN-202ENST00000539746 GNAI3P08754 354 aa14.87□□□□□ -0.03
VTN-202ENST00000539746 ABCC4O15439 1325 aa14.87□□□□□ -0.03
VTN-202ENST00000539746 RGL2O15211 777 aa14.86□□□□□ -0.03
VTN-202ENST00000539746 HSP90B1P14625 803 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms