RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SMIM5Q71RC9 77 aa22.74■■□□□ 1.23
DDB1-215ENST00000539712 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
DDB1-215ENST00000539712 HMOX1P09601 288 aa22.73■■□□□ 1.23
DDB1-215ENST00000539712 HMGB2P26583 209 aaKnown RBP22.72■■□□□ 1.23
DDB1-215ENST00000539712 MSH5O43196 834 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 CABP4P57796 275 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 C1orf141Q5JVX7 400 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 FLAD1Q8NFF5 587 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 UBR3Q6ZT12 1888 aa22.7■■□□□ 1.22
DDB1-215ENST00000539712 POLD1P28340 1107 aa22.69■■□□□ 1.22
DDB1-215ENST00000539712 NFATC2IPQ8NCF5 419 aa22.69■■□□□ 1.22
DDB1-215ENST00000539712 AK7Q96M32 723 aa22.69■■□□□ 1.22
DDB1-215ENST00000539712 MSL1Q68DK7 614 aa22.68■■□□□ 1.22
DDB1-215ENST00000539712 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.67■■□□□ 1.22
DDB1-215ENST00000539712 MTHFSDQ2M296 383 aaKnown RBP22.67■■□□□ 1.22
DDB1-215ENST00000539712 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
DDB1-215ENST00000539712 LGR6Q9HBX8 967 aa22.67■■□□□ 1.22
DDB1-215ENST00000539712 ZNF831Q5JPB2 1677 aa22.66■■□□□ 1.22
DDB1-215ENST00000539712 SCN11AQ9UI33 1791 aa22.66■■□□□ 1.22
DDB1-215ENST00000539712 SSFA2P28290 1259 aa22.65■■□□□ 1.22
DDB1-215ENST00000539712 PHF14O94880 888 aa22.64■■□□□ 1.21
DDB1-215ENST00000539712 RBM42Q9BTD8 480 aaKnown RBP22.64■■□□□ 1.21
DDB1-215ENST00000539712 GNPATO15228 680 aa22.63■■□□□ 1.21
DDB1-215ENST00000539712 NLGN2Q8NFZ4 835 aa22.63■■□□□ 1.21
DDB1-215ENST00000539712 DCAF8L1A6NGE4 600 aa22.62■■□□□ 1.21
DDB1-215ENST00000539712 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
DDB1-215ENST00000539712 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
DDB1-215ENST00000539712 SLC52A2Q9HAB3 445 aa22.62■■□□□ 1.21
DDB1-215ENST00000539712 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
DDB1-215ENST00000539712 U2SURPO15042 1029 aaKnown RBP22.61■■□□□ 1.21
DDB1-215ENST00000539712 PTCD1O75127 700 aaKnown RBP22.61■■□□□ 1.21
DDB1-215ENST00000539712 RC3H1Q5TC82 1133 aaKnown RBP22.61■■□□□ 1.21
DDB1-215ENST00000539712 MRC1P22897 1456 aa22.6■■□□□ 1.21
DDB1-215ENST00000539712 COL5A3P25940 1745 aaPredicted RBP22.6■■□□□ 1.21
DDB1-215ENST00000539712 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
DDB1-215ENST00000539712 YY1P25490 414 aa22.59■■□□□ 1.21
DDB1-215ENST00000539712 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
DDB1-215ENST00000539712 MYH14Q7Z406 1995 aaKnown RBP22.59■■□□□ 1.21
DDB1-215ENST00000539712 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
DDB1-215ENST00000539712 RPS6KA4O75676 772 aa22.56■■□□□ 1.2
DDB1-215ENST00000539712 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
DDB1-215ENST00000539712 RTCBQ9Y3I0 505 aaKnown RBP22.56■■□□□ 1.2
DDB1-215ENST00000539712 VIRMAQ69YN4 1812 aaKnown RBP22.55■■□□□ 1.2
DDB1-215ENST00000539712 SLC39A6Q13433 755 aa22.55■■□□□ 1.2
DDB1-215ENST00000539712 TRAPPC3LQ5T215 181 aa22.55■■□□□ 1.2
DDB1-215ENST00000539712 IL17REQ8NFR9 667 aa22.55■■□□□ 1.2
DDB1-215ENST00000539712 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
DDB1-215ENST00000539712 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
DDB1-215ENST00000539712 TJP1Q07157 1748 aa22.54■■□□□ 1.2
DDB1-215ENST00000539712 CICQ96RK0 1608 aaPredicted RBP22.54■■□□□ 1.2
DDB1-215ENST00000539712 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
DDB1-215ENST00000539712 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
DDB1-215ENST00000539712 INTS5Q6P9B9 1019 aaKnown RBP22.53■■□□□ 1.2
DDB1-215ENST00000539712 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
DDB1-215ENST00000539712 ADRA2BP18089 450 aa22.52■■□□□ 1.2
DDB1-215ENST00000539712 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
DDB1-215ENST00000539712 GPR162Q16538 588 aa22.51■■□□□ 1.19
DDB1-215ENST00000539712 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
DDB1-215ENST00000539712 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
DDB1-215ENST00000539712 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
DDB1-215ENST00000539712 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.193e-12■□□□□ 10.5
DDB1-215ENST00000539712 MMP10P09238 476 aa22.49■■□□□ 1.19
DDB1-215ENST00000539712 GYS1P13807 737 aa22.49■■□□□ 1.19
DDB1-215ENST00000539712 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
DDB1-215ENST00000539712 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
DDB1-215ENST00000539712 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
DDB1-215ENST00000539712 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
DDB1-215ENST00000539712 CEMIPQ8WUJ3 1361 aa22.48■■□□□ 1.19
DDB1-215ENST00000539712 FCHSD2O94868 740 aa22.47■■□□□ 1.19
DDB1-215ENST00000539712 RFC4P35249 363 aa22.47■■□□□ 1.19
DDB1-215ENST00000539712 NLGN1Q8N2Q7 840 aa22.47■■□□□ 1.19
DDB1-215ENST00000539712 C4AP0C0L4 1744 aa22.46■■□□□ 1.19
DDB1-215ENST00000539712 UBR2Q8IWV8 1755 aa22.46■■□□□ 1.19
DDB1-215ENST00000539712 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
DDB1-215ENST00000539712 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
DDB1-215ENST00000539712 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
DDB1-215ENST00000539712 SRP68Q9UHB9 627 aaKnown RBP22.45■■□□□ 1.18
DDB1-215ENST00000539712 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.18
DDB1-215ENST00000539712 CHD4Q14839 1912 aa22.45■■□□□ 1.18
DDB1-215ENST00000539712 SOS1Q07889 1333 aaPredicted RBP22.43■■□□□ 1.18
DDB1-215ENST00000539712 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
DDB1-215ENST00000539712 TEFQ10587 303 aa22.43■■□□□ 1.18
DDB1-215ENST00000539712 ZNF790Q6PG37 636 aa22.43■■□□□ 1.18
DDB1-215ENST00000539712 ZNF496Q96IT1 587 aaPredicted RBP22.43■■□□□ 1.18
DDB1-215ENST00000539712 FKBP8Q14318 412 aa22.42■■□□□ 1.18
DDB1-215ENST00000539712 ZNF784Q8NCA9 323 aaPredicted RBP22.41■■□□□ 1.18
DDB1-215ENST00000539712 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
DDB1-215ENST00000539712 KCNQ3O43525 872 aa22.4■■□□□ 1.18
DDB1-215ENST00000539712 KIF13BQ9NQT8 1826 aa22.39■■□□□ 1.17
DDB1-215ENST00000539712 GRIN3BO60391 1043 aa22.39■■□□□ 1.17
DDB1-215ENST00000539712 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.17
DDB1-215ENST00000539712 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 DDR1Q08345 913 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 MCM10Q7L590 875 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 TTC5Q8N0Z6 440 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 PLEKHF1Q96S99 279 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
DDB1-215ENST00000539712 KIAA1551Q9HCM1 1747 aa22.37■■□□□ 1.17
DDB1-215ENST00000539712 TM4SF1P30408 202 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms