RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 XPCQ01831 940 aaPredicted RBP12.79□□□□□ -0.36
SPARC-209ENST00000539687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPARC-209ENST00000539687 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
SPARC-209ENST00000539687 ERBB3P21860 1342 aa12.79□□□□□ -0.36
SPARC-209ENST00000539687 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
SPARC-209ENST00000539687 TEFQ10587 303 aa12.78□□□□□ -0.36
SPARC-209ENST00000539687 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
SPARC-209ENST00000539687 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
SPARC-209ENST00000539687 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
SPARC-209ENST00000539687 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
SPARC-209ENST00000539687 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
SPARC-209ENST00000539687 C8orf34Q49A92 452 aa12.77□□□□□ -0.37
SPARC-209ENST00000539687 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
SPARC-209ENST00000539687 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
SPARC-209ENST00000539687 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
SPARC-209ENST00000539687 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
SPARC-209ENST00000539687 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
SPARC-209ENST00000539687 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
SPARC-209ENST00000539687 RGS12O14924 1447 aa12.75□□□□□ -0.37
SPARC-209ENST00000539687 HMMRO75330 724 aa12.75□□□□□ -0.37
SPARC-209ENST00000539687 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
SPARC-209ENST00000539687 MYT1Q01538 1121 aa12.75□□□□□ -0.37
SPARC-209ENST00000539687 NUCB1Q02818 461 aa12.75□□□□□ -0.37
SPARC-209ENST00000539687 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
SPARC-209ENST00000539687 XIRP1Q702N8 1843 aaKnown RBP12.75□□□□□ -0.37
SPARC-209ENST00000539687 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
SPARC-209ENST00000539687 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
SPARC-209ENST00000539687 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
SPARC-209ENST00000539687 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
SPARC-209ENST00000539687 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
SPARC-209ENST00000539687 LRRC59Q96AG4 307 aaKnown RBP12.74□□□□□ -0.37
SPARC-209ENST00000539687 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
SPARC-209ENST00000539687 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
SPARC-209ENST00000539687 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
SPARC-209ENST00000539687 GNAI3P08754 354 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
SPARC-209ENST00000539687 HDGFL1Q5TGJ6 251 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 COL18A1P39060 1754 aa12.73□□□□□ -0.37
SPARC-209ENST00000539687 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
SPARC-209ENST00000539687 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
SPARC-209ENST00000539687 FLIIQ13045 1269 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
SPARC-209ENST00000539687 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
SPARC-209ENST00000539687 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.37
SPARC-209ENST00000539687 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
SPARC-209ENST00000539687 ANP32EQ9BTT0 268 aa12.71□□□□□ -0.37
SPARC-209ENST00000539687 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
SPARC-209ENST00000539687 ABCB7O75027 752 aa12.7□□□□□ -0.38
SPARC-209ENST00000539687 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
SPARC-209ENST00000539687 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
SPARC-209ENST00000539687 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
SPARC-209ENST00000539687 GNAI2P04899 355 aa12.69□□□□□ -0.38
SPARC-209ENST00000539687 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
SPARC-209ENST00000539687 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
SPARC-209ENST00000539687 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
SPARC-209ENST00000539687 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
SPARC-209ENST00000539687 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
SPARC-209ENST00000539687 MRC1P22897 1456 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 BMP2KLQ5H9B9 411 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 ANKRD45Q5TZF3 282 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 DCAF5Q96JK2 942 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
SPARC-209ENST00000539687 IBTKQ9P2D0 1353 aaPredicted RBP12.68□□□□□ -0.38
SPARC-209ENST00000539687 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 SIPA1L3O60292 1781 aaPredicted RBP12.67□□□□□ -0.38
SPARC-209ENST00000539687 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 PHKG2P15735 406 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 SLC4A10Q6U841 1118 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
SPARC-209ENST00000539687 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
SPARC-209ENST00000539687 BECN1Q14457 450 aa12.66□□□□□ -0.38
SPARC-209ENST00000539687 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
SPARC-209ENST00000539687 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
SPARC-209ENST00000539687 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
SPARC-209ENST00000539687 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
SPARC-209ENST00000539687 G2E3Q7L622 706 aa12.65□□□□□ -0.38
SPARC-209ENST00000539687 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
SPARC-209ENST00000539687 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
SPARC-209ENST00000539687 LNPKQ9C0E8 428 aa12.65□□□□□ -0.38
SPARC-209ENST00000539687 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
SPARC-209ENST00000539687 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
SPARC-209ENST00000539687 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
SPARC-209ENST00000539687 MEGF6O75095 1541 aa12.64□□□□□ -0.39
SPARC-209ENST00000539687 GIGYF1O75420 1035 aaPredicted RBP12.64□□□□□ -0.39
SPARC-209ENST00000539687 MEIS3Q99687 375 aa12.64□□□□□ -0.39
SPARC-209ENST00000539687 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
SPARC-209ENST00000539687 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms