RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 LINC00116Q8NCU8 138 aa34.71■■■■□ 3.15
DENR-204ENST00000539463 C4BP0C0L5 1744 aa34.69■■■■□ 3.14
DENR-204ENST00000539463 MSH5O43196 834 aa34.69■■■■□ 3.14
DENR-204ENST00000539463 LGR6Q9HBX8 967 aa34.69■■■■□ 3.14
DENR-204ENST00000539463 AK7Q96M32 723 aa34.68■■■■□ 3.14
DENR-204ENST00000539463 SLC4A9Q96Q91 983 aa34.67■■■■□ 3.14
DENR-204ENST00000539463 ARXQ96QS3 562 aa34.67■■■■□ 3.14
DENR-204ENST00000539463 AMIGO3Q86WK7 504 aa34.66■■■■□ 3.14
DENR-204ENST00000539463 FLAD1Q8NFF5 587 aa34.66■■■■□ 3.14
DENR-204ENST00000539463 RBM42Q9BTD8 480 aaKnown RBP34.66■■■■□ 3.14
DENR-204ENST00000539463 RNMTO43148 476 aaKnown RBP34.65■■■■□ 3.14
DENR-204ENST00000539463 NUDCQ9Y266 331 aa34.65■■■■□ 3.14
DENR-204ENST00000539463 FHDC1Q9C0D6 1143 aaPredicted RBP34.64■■■■□ 3.14
DENR-204ENST00000539463 SCN11AQ9UI33 1791 aa34.64■■■■□ 3.14
DENR-204ENST00000539463 SLC52A2Q9HAB3 445 aa34.63■■■■□ 3.13
DENR-204ENST00000539463 POLD1P28340 1107 aa34.62■■■■□ 3.13
DENR-204ENST00000539463 SMIM5Q71RC9 77 aa34.62■■■■□ 3.13
DENR-204ENST00000539463 SYT17Q9BSW7 474 aa34.61■■■■□ 3.13
DENR-204ENST00000539463 RSPH6AQ9H0K4 717 aa34.61■■■■□ 3.13
DENR-204ENST00000539463 COL24A1Q17RW2 1714 aa34.6■■■■□ 3.13
DENR-204ENST00000539463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.59■■■■□ 3.13
DENR-204ENST00000539463 PTCD1O75127 700 aaKnown RBP34.59■■■■□ 3.13
DENR-204ENST00000539463 DDX10Q13206 875 aaKnown RBP34.59■■■■□ 3.13
DENR-204ENST00000539463 PHF14O94880 888 aa34.58■■■■□ 3.13
DENR-204ENST00000539463 U2AF1L5P0DN76 240 aaPredicted RBP34.58■■■■□ 3.13
DENR-204ENST00000539463 SSFA2P28290 1259 aa34.58■■■■□ 3.13
DENR-204ENST00000539463 PRKAR2BP31323 418 aa34.58■■■■□ 3.13
DENR-204ENST00000539463 U2AF1Q01081 240 aaKnown RBP eCLIP34.58■■■■□ 3.13
DENR-204ENST00000539463 GAS2L2Q8NHY3 880 aa34.58■■■■□ 3.13
DENR-204ENST00000539463 ZNF831Q5JPB2 1677 aa34.57■■■■□ 3.13
DENR-204ENST00000539463 GNPATO15228 680 aa34.57■■■■□ 3.12
DENR-204ENST00000539463 PHACTR3Q96KR7 559 aa34.57■■■■□ 3.12
DENR-204ENST00000539463 MSL1Q68DK7 614 aa34.56■■■■□ 3.12
DENR-204ENST00000539463 MRC1P22897 1456 aa34.56■■■■□ 3.12
DENR-204ENST00000539463 UBR3Q6ZT12 1888 aa34.56■■■■□ 3.12
DENR-204ENST00000539463 ADAMTS7Q9UKP4 1686 aa34.55■■■■□ 3.12
DENR-204ENST00000539463 MAP3K5Q99683 1374 aa34.54■■■■□ 3.12
DENR-204ENST00000539463 GNAT3A8MTJ3 354 aa34.54■■■■□ 3.12
DENR-204ENST00000539463 FCHSD2O94868 740 aa34.53■■■■□ 3.12
DENR-204ENST00000539463 RC3H1Q5TC82 1133 aaKnown RBP34.53■■■■□ 3.12
DENR-204ENST00000539463 IL17REQ8NFR9 667 aa34.52■■■■□ 3.12
DENR-204ENST00000539463 CNTNAP4Q9C0A0 1308 aa34.51■■■■□ 3.11
DENR-204ENST00000539463 SLC39A6Q13433 755 aa34.5■■■■□ 3.11
DENR-204ENST00000539463 RTCBQ9Y3I0 505 aaKnown RBP34.49■■■■□ 3.11
DENR-204ENST00000539463 COL5A3P25940 1745 aaPredicted RBP34.48■■■■□ 3.11
DENR-204ENST00000539463 DCAF8L1A6NGE4 600 aa34.48■■■■□ 3.11
DENR-204ENST00000539463 RALBP1Q15311 655 aa34.48■■■■□ 3.11
DENR-204ENST00000539463 VIRMAQ69YN4 1812 aaKnown RBP34.47■■■■□ 3.11
DENR-204ENST00000539463 ZEB1P37275 1124 aaPredicted RBP34.46■■■■□ 3.11
DENR-204ENST00000539463 KLHL34Q8N239 644 aa34.46■■■■□ 3.11
DENR-204ENST00000539463 RPS6KA4O75676 772 aa34.45■■■■□ 3.11
DENR-204ENST00000539463 TRAPPC3LQ5T215 181 aa34.45■■■■□ 3.11
DENR-204ENST00000539463 CRKLP46109 303 aaKnown RBP34.44■■■■□ 3.1
DENR-204ENST00000539463 TEFQ10587 303 aa34.43■■■■□ 3.1
DENR-204ENST00000539463 ADRA2BP18089 450 aa34.42■■■■□ 3.1
DENR-204ENST00000539463 ARHGEF1Q92888 912 aaKnown RBP34.42■■■■□ 3.1
DENR-204ENST00000539463 TJP1Q07157 1748 aa34.41■■■■□ 3.1
DENR-204ENST00000539463 CICQ96RK0 1608 aaPredicted RBP34.41■■■■□ 3.1
DENR-204ENST00000539463 KCPQ6ZWJ8 1503 aa34.41■■■■□ 3.1
DENR-204ENST00000539463 CEMIPQ8WUJ3 1361 aa34.41■■■■□ 3.1
DENR-204ENST00000539463 DNAJC10Q8IXB1 793 aa34.41■■■■□ 3.1
DENR-204ENST00000539463 MYH14Q7Z406 1995 aaKnown RBP34.38■■■■□ 3.09
DENR-204ENST00000539463 INTS5Q6P9B9 1019 aaKnown RBP34.38■■■■□ 3.09
DENR-204ENST00000539463 NLGN2Q8NFZ4 835 aa34.37■■■■□ 3.09
DENR-204ENST00000539463 CYP19A1P11511 503 aaPredicted RBP34.36■■■■□ 3.09
DENR-204ENST00000539463 RFC4P35249 363 aa34.36■■■■□ 3.09
DENR-204ENST00000539463 TTC5Q8N0Z6 440 aa34.36■■■■□ 3.09
DENR-204ENST00000539463 VSIG10Q8N0Z9 540 aa34.36■■■■□ 3.09
DENR-204ENST00000539463 ZNF790Q6PG37 636 aa34.35■■■■□ 3.09
DENR-204ENST00000539463 RTF1Q92541 710 aaKnown RBP34.34■■■■□ 3.09
DENR-204ENST00000539463 PLEKHF1Q96S99 279 aa34.34■■■■□ 3.09
DENR-204ENST00000539463 CCDC87Q9NVE4 849 aa34.34■■■■□ 3.09
DENR-204ENST00000539463 SIPA1L3O60292 1781 aaPredicted RBP34.32■■■■□ 3.08
DENR-204ENST00000539463 HTATSF1O43719 755 aaKnown RBP34.32■■■■□ 3.08
DENR-204ENST00000539463 MCM10Q7L590 875 aa34.32■■■■□ 3.08
DENR-204ENST00000539463 NLGN1Q8N2Q7 840 aa34.32■■■■□ 3.08
DENR-204ENST00000539463 ZNF496Q96IT1 587 aaPredicted RBP34.32■■■■□ 3.08
DENR-204ENST00000539463 CD2APQ9Y5K6 639 aa34.32■■■■□ 3.08
DENR-204ENST00000539463 MYBBP1AQ9BQG0 1328 aaKnown RBP34.31■■■■□ 3.08
DENR-204ENST00000539463 UBR2Q8IWV8 1755 aa34.31■■■■□ 3.08
DENR-204ENST00000539463 BTBD11A6QL63 1104 aa34.3■■■■□ 3.08
DENR-204ENST00000539463 NEFMP07197 916 aa34.3■■■■□ 3.08
DENR-204ENST00000539463 GYS1P13807 737 aa34.3■■■■□ 3.08
DENR-204ENST00000539463 MMP10P09238 476 aa34.29■■■■□ 3.08
DENR-204ENST00000539463 DCTN1Q14203 1278 aa34.29■■■■□ 3.08
DENR-204ENST00000539463 KCNQ3O43525 872 aa34.27■■■■□ 3.08
DENR-204ENST00000539463 PNNQ9H307 717 aaKnown RBP34.27■■■■□ 3.08
DENR-204ENST00000539463 SOS1Q07889 1333 aaPredicted RBP34.27■■■■□ 3.08
DENR-204ENST00000539463 UTRNP46939 3433 aa34.26■■■■□ 3.08
DENR-204ENST00000539463 HEG1Q9ULI3 1381 aa34.26■■■■□ 3.08
DENR-204ENST00000539463 GPR162Q16538 588 aa34.26■■■■□ 3.08
DENR-204ENST00000539463 SRP68Q9UHB9 627 aaKnown RBP34.26■■■■□ 3.08
DENR-204ENST00000539463 STARD3NLO95772 234 aa34.25■■■■□ 3.07
DENR-204ENST00000539463 FMNL2Q96PY5 1086 aa34.25■■■■□ 3.07
DENR-204ENST00000539463 ZBTB1Q9Y2K1 713 aa34.25■■■■□ 3.07
DENR-204ENST00000539463 C4AP0C0L4 1744 aa34.24■■■■□ 3.07
DENR-204ENST00000539463 USP42Q9H9J4 1324 aaKnown RBP34.24■■■■□ 3.07
DENR-204ENST00000539463 GOLGB1Q14789 3259 aaKnown RBP34.23■■■■□ 3.07
DENR-204ENST00000539463 TEX13AQ9BXU3 409 aaPredicted RBP34.23■■■■□ 3.07
DENR-204ENST00000539463 YY1P25490 414 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms