RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 CENPBP07199 599 aaPredicted RBP18.41■□□□□ 0.54
PDE4C-204ENST00000539010 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
PDE4C-204ENST00000539010 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
PDE4C-204ENST00000539010 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
PDE4C-204ENST00000539010 BRWD3Q6RI45 1802 aa18.41■□□□□ 0.54
PDE4C-204ENST00000539010 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
PDE4C-204ENST00000539010 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
PDE4C-204ENST00000539010 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
PDE4C-204ENST00000539010 BCL9O00512 1426 aa18.4■□□□□ 0.54
PDE4C-204ENST00000539010 DUSP27Q5VZP5 1158 aa18.39■□□□□ 0.53
PDE4C-204ENST00000539010 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
PDE4C-204ENST00000539010 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
PDE4C-204ENST00000539010 ITGB4P16144 1822 aa18.38■□□□□ 0.53
PDE4C-204ENST00000539010 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
PDE4C-204ENST00000539010 RGS12O14924 1447 aa18.38■□□□□ 0.53
PDE4C-204ENST00000539010 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
PDE4C-204ENST00000539010 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
PDE4C-204ENST00000539010 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
PDE4C-204ENST00000539010 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
PDE4C-204ENST00000539010 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
PDE4C-204ENST00000539010 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
PDE4C-204ENST00000539010 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
PDE4C-204ENST00000539010 ACSBG1Q96GR2 724 aa18.35■□□□□ 0.53
PDE4C-204ENST00000539010 PIGBQ92521 554 aa18.34■□□□□ 0.53
PDE4C-204ENST00000539010 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
PDE4C-204ENST00000539010 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
PDE4C-204ENST00000539010 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
PDE4C-204ENST00000539010 SBF2Q86WG5 1849 aa18.33■□□□□ 0.52
PDE4C-204ENST00000539010 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
PDE4C-204ENST00000539010 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
PDE4C-204ENST00000539010 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
PDE4C-204ENST00000539010 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
PDE4C-204ENST00000539010 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
PDE4C-204ENST00000539010 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
PDE4C-204ENST00000539010 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
PDE4C-204ENST00000539010 KCNQ3O43525 872 aa18.29■□□□□ 0.52
PDE4C-204ENST00000539010 KCNQ2O43526 872 aa18.29■□□□□ 0.52
PDE4C-204ENST00000539010 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
PDE4C-204ENST00000539010 CHMP4AQ9BY43 222 aa18.29■□□□□ 0.52
PDE4C-204ENST00000539010 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
PDE4C-204ENST00000539010 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
PDE4C-204ENST00000539010 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
PDE4C-204ENST00000539010 ZNF428Q96B54 188 aa18.28■□□□□ 0.52
PDE4C-204ENST00000539010 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
PDE4C-204ENST00000539010 HOXB7P09629 217 aa18.28■□□□□ 0.52
PDE4C-204ENST00000539010 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
PDE4C-204ENST00000539010 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
PDE4C-204ENST00000539010 UBR2Q8IWV8 1755 aa18.27■□□□□ 0.51
PDE4C-204ENST00000539010 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
PDE4C-204ENST00000539010 EP400Q96L91 3159 aa18.26■□□□□ 0.51
PDE4C-204ENST00000539010 BTAF1O14981 1849 aa18.26■□□□□ 0.51
PDE4C-204ENST00000539010 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
PDE4C-204ENST00000539010 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
PDE4C-204ENST00000539010 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
PDE4C-204ENST00000539010 VAMP4O75379 141 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
PDE4C-204ENST00000539010 TRIM37O94972 964 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
PDE4C-204ENST00000539010 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
PDE4C-204ENST00000539010 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
PDE4C-204ENST00000539010 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
PDE4C-204ENST00000539010 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
PDE4C-204ENST00000539010 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
PDE4C-204ENST00000539010 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
PDE4C-204ENST00000539010 CCDC30Q5VVM6 783 aa18.21■□□□□ 0.51
PDE4C-204ENST00000539010 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
PDE4C-204ENST00000539010 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
PDE4C-204ENST00000539010 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
PDE4C-204ENST00000539010 RARSP54136 660 aaKnown RBP18.2■□□□□ 0.5
PDE4C-204ENST00000539010 SIK1P57059 783 aa18.2■□□□□ 0.5
PDE4C-204ENST00000539010 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
PDE4C-204ENST00000539010 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
PDE4C-204ENST00000539010 STK31Q9BXU1 1019 aa18.19■□□□□ 0.5
PDE4C-204ENST00000539010 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
PDE4C-204ENST00000539010 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
PDE4C-204ENST00000539010 STARD3NLO95772 234 aa18.18■□□□□ 0.5
PDE4C-204ENST00000539010 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
PDE4C-204ENST00000539010 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
PDE4C-204ENST00000539010 C5P01031 1676 aa18.18■□□□□ 0.5
PDE4C-204ENST00000539010 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
PDE4C-204ENST00000539010 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
PDE4C-204ENST00000539010 LY75O60449 1722 aa18.17■□□□□ 0.5
PDE4C-204ENST00000539010 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
PDE4C-204ENST00000539010 APBA3O96018 575 aa18.16■□□□□ 0.5
PDE4C-204ENST00000539010 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
PDE4C-204ENST00000539010 PLSCR1O15162 318 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
PDE4C-204ENST00000539010 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-204ENST00000539010 ERBB4Q15303 1308 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-204ENST00000539010 SLC27A3Q5K4L6 730 aa18.15■□□□□ 0.5
PDE4C-204ENST00000539010 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-204ENST00000539010 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
PDE4C-204ENST00000539010 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms