RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 ZNF76P36508 570 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 ZSCAN30Q86W11 494 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 TAF4BQ92750 862 aa16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
PLXNB3-209ENST00000538966 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 KRT32Q14532 448 aa16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 IBSPP21815 317 aaPredicted RBP16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 MCM10Q7L590 875 aa16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 CDK13Q14004 1512 aaKnown RBP16.59■□□□□ 0.25
PLXNB3-209ENST00000538966 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.25
PLXNB3-209ENST00000538966 AIDAQ96BJ3 306 aa16.58■□□□□ 0.25
PLXNB3-209ENST00000538966 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
PLXNB3-209ENST00000538966 TMPOP42166 694 aaKnown RBP16.58■□□□□ 0.24
PLXNB3-209ENST00000538966 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
PLXNB3-209ENST00000538966 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
PLXNB3-209ENST00000538966 GBP2P32456 591 aaPredicted RBP16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 MX1P20591 662 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 CASQ1P31415 396 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 RRP9O43818 475 aaKnown RBP16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 SSFA2P28290 1259 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 WASF1Q92558 559 aa16.57■□□□□ 0.24
PLXNB3-209ENST00000538966 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 DNA2P51530 1060 aa16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
PLXNB3-209ENST00000538966 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 PPM1FP49593 454 aaPredicted RBP16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 JAKMIP3Q5VZ66 844 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 CCDC183Q5T5S1 534 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 TRMT1Q9NXH9 659 aaKnown RBP16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 CCDC82Q8N4S0 544 aa16.55■□□□□ 0.24
PLXNB3-209ENST00000538966 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 CRACR2AQ9BSW2 395 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 KIF14Q15058 1648 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 FCHSD2O94868 740 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 METTL24Q5JXM2 366 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
PLXNB3-209ENST00000538966 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 POLR3GO15318 223 aaPredicted RBP16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 EZRP15311 586 aaKnown RBP16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 SPA17Q15506 151 aa16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
PLXNB3-209ENST00000538966 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
PLXNB3-209ENST00000538966 ANO10Q9NW15 660 aa16.52■□□□□ 0.24
PLXNB3-209ENST00000538966 TRERF1Q96PN7 1200 aa16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 MYD88Q99836 296 aa16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 F6X3S4 739 aa16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 CCDC97Q96F63 343 aaPredicted RBP16.52■□□□□ 0.23
PLXNB3-209ENST00000538966 NEBLO76041 1014 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 DYDC1Q8WWB3 177 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 GOPCQ9HD26 462 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 KIF5CO60282 957 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
PLXNB3-209ENST00000538966 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 MAP2K1Q02750 393 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 C16orf45Q96MC5 204 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 KIF18AQ8NI77 898 aa16.5■□□□□ 0.23
PLXNB3-209ENST00000538966 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms