RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
SMCO2-204ENST00000538647 TMEM164Q5U3C3 297 aa16.29■□□□□ 0.2
SMCO2-204ENST00000538647 Q6ZNB5 142 aa16.29■□□□□ 0.2
SMCO2-204ENST00000538647 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
SMCO2-204ENST00000538647 PURBQ96QR8 312 aaKnown RBP16.29■□□□□ 0.2
SMCO2-204ENST00000538647 SPINT1O43278 529 aa16.28■□□□□ 0.2
SMCO2-204ENST00000538647 XAGE2Q96GT9 111 aa16.28■□□□□ 0.2
SMCO2-204ENST00000538647 INSM2Q96T92 566 aaPredicted RBP16.28■□□□□ 0.2
SMCO2-204ENST00000538647 SCARF1Q14162 830 aa16.27■□□□□ 0.2
SMCO2-204ENST00000538647 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
SMCO2-204ENST00000538647 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
SMCO2-204ENST00000538647 DACH1Q9UI36 760 aa16.27■□□□□ 0.2
SMCO2-204ENST00000538647 BACH1O14867 736 aa16.25■□□□□ 0.19
SMCO2-204ENST00000538647 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
SMCO2-204ENST00000538647 ATP13A2Q9NQ11 1180 aa16.25■□□□□ 0.19
SMCO2-204ENST00000538647 POLMQ9NP87 494 aaPredicted RBP16.24■□□□□ 0.19
SMCO2-204ENST00000538647 HRH3Q9Y5N1 445 aa16.24■□□□□ 0.19
SMCO2-204ENST00000538647 M0R2N6 131 aa16.23■□□□□ 0.19
SMCO2-204ENST00000538647 CTSOP43234 321 aaPredicted RBP16.23■□□□□ 0.19
SMCO2-204ENST00000538647 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
SMCO2-204ENST00000538647 CARNS1A5YM72 827 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 TMEM88BA6NKF7 163 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 CENPCQ03188 943 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 TLR1Q15399 786 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 ZFP42Q96MM3 310 aa16.22■□□□□ 0.19
SMCO2-204ENST00000538647 SMTNP53814 917 aa16.21■□□□□ 0.19
SMCO2-204ENST00000538647 TNS4Q8IZW8 715 aa16.21■□□□□ 0.19
SMCO2-204ENST00000538647 HINFPQ9BQA5 517 aa16.21■□□□□ 0.19
SMCO2-204ENST00000538647 USTQ9Y2C2 406 aa16.21■□□□□ 0.19
SMCO2-204ENST00000538647 LGR5O75473 907 aa16.2■□□□□ 0.18
SMCO2-204ENST00000538647 LCE2BO14633 110 aa16.19■□□□□ 0.18
SMCO2-204ENST00000538647 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
SMCO2-204ENST00000538647 HOMEZQ8IX15 550 aa16.19■□□□□ 0.18
SMCO2-204ENST00000538647 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
SMCO2-204ENST00000538647 A6NJY4 79 aa16.18■□□□□ 0.18
SMCO2-204ENST00000538647 EPHA4P54764 986 aa16.18■□□□□ 0.18
SMCO2-204ENST00000538647 SWI5Q1ZZU3 235 aa16.18■□□□□ 0.18
SMCO2-204ENST00000538647 RNF144AP50876 292 aaPredicted RBP16.17■□□□□ 0.18
SMCO2-204ENST00000538647 TTLL8A6PVC2 850 aa16.16■□□□□ 0.18
SMCO2-204ENST00000538647 GPC1P35052 558 aa16.16■□□□□ 0.18
SMCO2-204ENST00000538647 MTFR1Q15390 333 aa16.16■□□□□ 0.18
SMCO2-204ENST00000538647 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
SMCO2-204ENST00000538647 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
SMCO2-204ENST00000538647 RNF217Q8TC41 542 aa16.15■□□□□ 0.18
SMCO2-204ENST00000538647 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
SMCO2-204ENST00000538647 SCHIP1Q9P0W5 487 aaPredicted RBP16.15■□□□□ 0.18
SMCO2-204ENST00000538647 GRIP2Q9C0E4 1043 aa16.14■□□□□ 0.17
SMCO2-204ENST00000538647 CLP1Q92989 425 aaKnown RBP16.13■□□□□ 0.17
SMCO2-204ENST00000538647 TSPAN10Q9H1Z9 355 aaPredicted RBP16.13■□□□□ 0.17
SMCO2-204ENST00000538647 USP3Q9Y6I4 520 aa16.13■□□□□ 0.17
SMCO2-204ENST00000538647 FOXK2Q01167 660 aa16.12■□□□□ 0.17
SMCO2-204ENST00000538647 PDE4CQ08493 712 aa16.12■□□□□ 0.17
SMCO2-204ENST00000538647 TBCELQ5QJ74 424 aa16.12■□□□□ 0.17
SMCO2-204ENST00000538647 SLAIN2Q9P270 581 aa16.12■□□□□ 0.17
SMCO2-204ENST00000538647 FIGNL2A6NMB9 653 aa16.11■□□□□ 0.17
SMCO2-204ENST00000538647 CDK2AP1O14519 115 aa16.11■□□□□ 0.17
SMCO2-204ENST00000538647 PRMT3O60678 531 aa16.11■□□□□ 0.17
SMCO2-204ENST00000538647 TMEM214Q6NUQ4 689 aaKnown RBP16.11■□□□□ 0.17
SMCO2-204ENST00000538647 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
SMCO2-204ENST00000538647 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
SMCO2-204ENST00000538647 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
SMCO2-204ENST00000538647 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
SMCO2-204ENST00000538647 PRIMPOLQ96LW4 560 aa16.1■□□□□ 0.17
SMCO2-204ENST00000538647 GMPR2Q9P2T1 348 aaKnown RBP16.1■□□□□ 0.17
SMCO2-204ENST00000538647 PRICKLE2Q7Z3G6 844 aa16.09■□□□□ 0.17
SMCO2-204ENST00000538647 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
SMCO2-204ENST00000538647 DNMT3LQ9UJW3 386 aa16.09■□□□□ 0.17
SMCO2-204ENST00000538647 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
SMCO2-204ENST00000538647 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.16
SMCO2-204ENST00000538647 SCG3Q8WXD2 468 aaKnown RBP16.08■□□□□ 0.16
SMCO2-204ENST00000538647 WEE1P30291 646 aa16.07■□□□□ 0.16
SMCO2-204ENST00000538647 LYSMD3Q7Z3D4 306 aa16.07■□□□□ 0.16
SMCO2-204ENST00000538647 C21orf2O43822 256 aa16.06■□□□□ 0.16
SMCO2-204ENST00000538647 MAN1A2O60476 641 aa16.06■□□□□ 0.16
SMCO2-204ENST00000538647 OCLNQ16625 522 aa16.06■□□□□ 0.16
SMCO2-204ENST00000538647 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
SMCO2-204ENST00000538647 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 SOBPA7XYQ1 873 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 PDIA4P13667 645 aaKnown RBP16.05■□□□□ 0.16
SMCO2-204ENST00000538647 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 RHBDD1Q8TEB9 315 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 TRIM47Q96LD4 638 aa16.05■□□□□ 0.16
SMCO2-204ENST00000538647 POU4F2Q12837 409 aa16.04■□□□□ 0.16
SMCO2-204ENST00000538647 ZNF295-AS1Q8N0V1 137 aa16.04■□□□□ 0.16
SMCO2-204ENST00000538647 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
SMCO2-204ENST00000538647 PPP1R12BO60237 982 aaPredicted RBP16.03■□□□□ 0.16
SMCO2-204ENST00000538647 IGFBP4P22692 258 aa16.03■□□□□ 0.16
SMCO2-204ENST00000538647 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
SMCO2-204ENST00000538647 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
SMCO2-204ENST00000538647 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
SMCO2-204ENST00000538647 CABP1Q9NZU7 370 aa16.03■□□□□ 0.16
SMCO2-204ENST00000538647 RHOQP17081 205 aa16.02■□□□□ 0.16
SMCO2-204ENST00000538647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.02■□□□□ 0.16
SMCO2-204ENST00000538647 C4orf17Q53FE4 359 aa16.02■□□□□ 0.16
SMCO2-204ENST00000538647 CXXC1Q9P0U4 656 aaPredicted RBP16.02■□□□□ 0.16
SMCO2-204ENST00000538647 PHKA2P46019 1235 aa16.01■□□□□ 0.15
SMCO2-204ENST00000538647 PSMA6P60900 246 aaKnown RBP16.01■□□□□ 0.15
SMCO2-204ENST00000538647 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms