RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 LETM1O95202 739 aaPredicted RBP22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 HAP1P54257 671 aaPredicted RBP22.48■■□□□ 1.19
SFSWAP-207ENST00000538548 GDPD2Q9HCC8 539 aa22.47■■□□□ 1.19
SFSWAP-207ENST00000538548 HMMRO75330 724 aa22.47■■□□□ 1.19
SFSWAP-207ENST00000538548 ESYT1Q9BSJ8 1104 aa22.47■■□□□ 1.19
SFSWAP-207ENST00000538548 IL13P35225 146 aa22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 ATP2B3Q16720 1220 aa22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 C17orf53Q8N3J3 647 aaPredicted RBP22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 PRAM1Q96QH2 718 aa22.46■■□□□ 1.19
SFSWAP-207ENST00000538548 FBLN1P23142 703 aa22.45■■□□□ 1.19
SFSWAP-207ENST00000538548 IL17RAQ96F46 866 aa22.45■■□□□ 1.19
SFSWAP-207ENST00000538548 CABP1Q9NZU7 370 aa22.45■■□□□ 1.19
SFSWAP-207ENST00000538548 PALD1Q9ULE6 856 aa22.45■■□□□ 1.18
SFSWAP-207ENST00000538548 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 MEIS3Q99687 375 aa22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 MX1P20591 662 aa22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 PTPRCP08575 1304 aa22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 HCLS1P14317 486 aaPredicted RBP22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 FOXD4L6Q3SYB3 417 aaPredicted RBP22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 FOXD4L3Q6VB84 417 aaPredicted RBP22.44■■□□□ 1.18
SFSWAP-207ENST00000538548 SSH2Q76I76 1423 aa22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 KDM4AO75164 1064 aa22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 PDCL2Q8N4E4 241 aa22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 TCHHQ07283 1943 aa22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 NOL8Q76FK4 1167 aaKnown RBP22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 ESF1Q9H501 851 aaKnown RBP22.43■■□□□ 1.18
SFSWAP-207ENST00000538548 CDK12Q9NYV4 1490 aaPredicted RBP22.42■■□□□ 1.18
SFSWAP-207ENST00000538548 CDK19Q9BWU1 502 aa22.42■■□□□ 1.18
SFSWAP-207ENST00000538548 CHAF1AQ13111 956 aaPredicted RBP22.42■■□□□ 1.18
SFSWAP-207ENST00000538548 RPAP1Q9BWH6 1393 aaPredicted RBP22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 KIAA1524Q8TCG1 905 aa22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 FAM177BA6PVY3 158 aa22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 TPM3P06753 285 aa22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 EMILIN1Q9Y6C2 1016 aa22.41■■□□□ 1.18
SFSWAP-207ENST00000538548 KRT24Q2M2I5 525 aa22.4■■□□□ 1.18
SFSWAP-207ENST00000538548 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
SFSWAP-207ENST00000538548 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
SFSWAP-207ENST00000538548 ANKRD7Q92527 254 aa22.4■■□□□ 1.18
SFSWAP-207ENST00000538548 TUBGCP6Q96RT7 1819 aa22.4■■□□□ 1.18
SFSWAP-207ENST00000538548 UBE2HP62256 183 aa22.39■■□□□ 1.18
SFSWAP-207ENST00000538548 SALL3Q9BXA9 1300 aa22.39■■□□□ 1.17
SFSWAP-207ENST00000538548 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
SFSWAP-207ENST00000538548 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 MYO5BQ9ULV0 1848 aa22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 ATP7BP35670 1465 aa22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 A0A0U1RQG5 324 aaPredicted RBP22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 CHMLP26374 656 aa22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
SFSWAP-207ENST00000538548 PLEKHG5O94827 1062 aa22.37■■□□□ 1.17
SFSWAP-207ENST00000538548 UPF3BQ9BZI7 483 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-207ENST00000538548 RIOK3O14730 519 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-207ENST00000538548 CTIFO43310 598 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-207ENST00000538548 CNPY2Q9Y2B0 182 aa22.37■■□□□ 1.17
SFSWAP-207ENST00000538548 EPB41L2O43491 1005 aaKnown RBP22.36■■□□□ 1.17
SFSWAP-207ENST00000538548 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.36■■□□□ 1.17
SFSWAP-207ENST00000538548 FUCA2Q9BTY2 467 aa22.36■■□□□ 1.17
SFSWAP-207ENST00000538548 KCNF1Q9H3M0 494 aa22.35■■□□□ 1.17
SFSWAP-207ENST00000538548 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 SPDYE4A6NLX3 237 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 ZSCAN22P10073 491 aaPredicted RBP22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 TSHZ3Q63HK5 1081 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 FEZ1Q99689 392 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 CHL1O00533 1208 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 PYCARDQ9ULZ3 195 aa22.34■■□□□ 1.17
SFSWAP-207ENST00000538548 GOLGA6L6A8MZA4 724 aa22.33■■□□□ 1.17
SFSWAP-207ENST00000538548 PLCB2Q00722 1185 aa22.32■■□□□ 1.16
SFSWAP-207ENST00000538548 LRRCC1Q9C099 1032 aa22.32■■□□□ 1.16
SFSWAP-207ENST00000538548 U2AF2P26368 475 aaKnown RBP eCLIP22.32■■□□□ 1.165e-9■■■■■ 35.4
SFSWAP-207ENST00000538548 RILPL2Q969X0 211 aa22.32■■□□□ 1.16
SFSWAP-207ENST00000538548 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
SFSWAP-207ENST00000538548 ATP6V1DQ9Y5K8 247 aa22.32■■□□□ 1.16
SFSWAP-207ENST00000538548 TRIM6-TRIM34B2RNG4 842 aa22.31■■□□□ 1.16
SFSWAP-207ENST00000538548 AP5Z1O43299 807 aa22.3■■□□□ 1.16
SFSWAP-207ENST00000538548 HSPA4P34932 840 aa22.3■■□□□ 1.16
SFSWAP-207ENST00000538548 CCT4P50991 539 aaKnown RBP22.3■■□□□ 1.16
SFSWAP-207ENST00000538548 STX6O43752 255 aa22.3■■□□□ 1.16
SFSWAP-207ENST00000538548 SLC4A2P04920 1241 aa22.29■■□□□ 1.16
SFSWAP-207ENST00000538548 GIMAP6Q6P9H5 292 aa22.29■■□□□ 1.16
SFSWAP-207ENST00000538548 STAP2Q9UGK3 403 aa22.29■■□□□ 1.16
SFSWAP-207ENST00000538548 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
SFSWAP-207ENST00000538548 GNAI2P04899 355 aa22.29■■□□□ 1.16
SFSWAP-207ENST00000538548 F13A1P00488 732 aa22.28■■□□□ 1.16
SFSWAP-207ENST00000538548 SYT1P21579 422 aa22.28■■□□□ 1.16
SFSWAP-207ENST00000538548 SYCP1Q15431 976 aa22.28■■□□□ 1.16
SFSWAP-207ENST00000538548 FIBPO43427 364 aa22.27■■□□□ 1.16
SFSWAP-207ENST00000538548 TAF3Q5VWG9 929 aa22.27■■□□□ 1.16
SFSWAP-207ENST00000538548 OGFRQ9NZT2 677 aa22.27■■□□□ 1.16
SFSWAP-207ENST00000538548 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.27■■□□□ 1.16
SFSWAP-207ENST00000538548 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
SFSWAP-207ENST00000538548 NME9Q86XW9 330 aa22.26■■□□□ 1.15
SFSWAP-207ENST00000538548 SPC24Q8NBT2 197 aa22.26■■□□□ 1.15
SFSWAP-207ENST00000538548 TPRNQ4KMQ1 711 aa22.26■■□□□ 1.15
SFSWAP-207ENST00000538548 AOX1Q06278 1338 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms