RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
CDK2AP1-204ENST00000538446 BAG6P46379 1132 aa16.66■□□□□ 0.26
CDK2AP1-204ENST00000538446 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
CDK2AP1-204ENST00000538446 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK2AP1-204ENST00000538446 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
CDK2AP1-204ENST00000538446 PALLDQ8WX93 1383 aa16.64■□□□□ 0.26
CDK2AP1-204ENST00000538446 ATG3Q9NT62 314 aa16.64■□□□□ 0.25
CDK2AP1-204ENST00000538446 ASAP1Q9ULH1 1129 aa16.64■□□□□ 0.25
CDK2AP1-204ENST00000538446 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
CDK2AP1-204ENST00000538446 PLSCR1O15162 318 aa16.63■□□□□ 0.25
CDK2AP1-204ENST00000538446 SLC39A6Q13433 755 aa16.63■□□□□ 0.25
CDK2AP1-204ENST00000538446 GNAI1P63096 354 aa16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
CDK2AP1-204ENST00000538446 EN1Q05925 392 aaPredicted RBP16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 TSPYL4Q9UJ04 414 aa16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 IL16Q14005 1332 aa16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
CDK2AP1-204ENST00000538446 CHL1O00533 1208 aa16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
CDK2AP1-204ENST00000538446 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
CDK2AP1-204ENST00000538446 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
CDK2AP1-204ENST00000538446 CAMKK2Q96RR4 588 aa16.59■□□□□ 0.25
CDK2AP1-204ENST00000538446 BTAF1O14981 1849 aa16.59■□□□□ 0.25
CDK2AP1-204ENST00000538446 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 SOCS7O14512 581 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 KCNQ3O43525 872 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 SIK1P57059 783 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 SLC27A3Q5K4L6 730 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 CCNL1Q9UK58 526 aaPredicted RBP16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 EP400Q96L91 3159 aa16.58■□□□□ 0.24
CDK2AP1-204ENST00000538446 ITGB4P16144 1822 aa16.57■□□□□ 0.24
CDK2AP1-204ENST00000538446 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
CDK2AP1-204ENST00000538446 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
CDK2AP1-204ENST00000538446 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
CDK2AP1-204ENST00000538446 MBIPQ9NS73 344 aa16.57■□□□□ 0.24
CDK2AP1-204ENST00000538446 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
CDK2AP1-204ENST00000538446 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
CDK2AP1-204ENST00000538446 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
CDK2AP1-204ENST00000538446 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
CDK2AP1-204ENST00000538446 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
CDK2AP1-204ENST00000538446 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
CDK2AP1-204ENST00000538446 PROM2Q8N271 834 aa16.55■□□□□ 0.24
CDK2AP1-204ENST00000538446 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
CDK2AP1-204ENST00000538446 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 E9PSI1 815 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 KCNQ4P56696 695 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
CDK2AP1-204ENST00000538446 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
CDK2AP1-204ENST00000538446 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
CDK2AP1-204ENST00000538446 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
CDK2AP1-204ENST00000538446 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
CDK2AP1-204ENST00000538446 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.24
CDK2AP1-204ENST00000538446 RGPD4Q7Z3J3 1758 aa16.52■□□□□ 0.24
CDK2AP1-204ENST00000538446 ITPK1Q13572 414 aa16.52■□□□□ 0.24
CDK2AP1-204ENST00000538446 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.24
CDK2AP1-204ENST00000538446 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CDK2AP1-204ENST00000538446 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
CDK2AP1-204ENST00000538446 VIRMAQ69YN4 1812 aaKnown RBP16.51■□□□□ 0.23
CDK2AP1-204ENST00000538446 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
CDK2AP1-204ENST00000538446 STARD3NLO95772 234 aa16.5■□□□□ 0.23
CDK2AP1-204ENST00000538446 SLFN5Q08AF3 891 aa16.5■□□□□ 0.23
CDK2AP1-204ENST00000538446 CDCA7LQ96GN5 454 aa16.5■□□□□ 0.23
CDK2AP1-204ENST00000538446 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
CDK2AP1-204ENST00000538446 HOXB7P09629 217 aa16.49■□□□□ 0.23
CDK2AP1-204ENST00000538446 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CDK2AP1-204ENST00000538446 LY75O60449 1722 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 NBPF14Q5TI25 921 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 UBR2Q8IWV8 1755 aa16.48■□□□□ 0.23
CDK2AP1-204ENST00000538446 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
CDK2AP1-204ENST00000538446 C8orf58Q8NAV2 365 aa16.47■□□□□ 0.23
CDK2AP1-204ENST00000538446 AK7Q96M32 723 aa16.47■□□□□ 0.23
CDK2AP1-204ENST00000538446 STK32BQ9NY57 414 aa16.47■□□□□ 0.23
CDK2AP1-204ENST00000538446 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
CDK2AP1-204ENST00000538446 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 CNTNAP4Q9C0A0 1308 aa16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 EXOSC9Q06265 439 aaKnown RBP16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms