RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 NBR1Q14596 966 aa11.7□□□□□ -0.54
DDB1-211ENST00000538280 EZH2Q15910 746 aaKnown RBP11.7□□□□□ -0.54
DDB1-211ENST00000538280 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
DDB1-211ENST00000538280 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
DDB1-211ENST00000538280 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
DDB1-211ENST00000538280 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
DDB1-211ENST00000538280 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 CHL1O00533 1208 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
DDB1-211ENST00000538280 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
DDB1-211ENST00000538280 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
DDB1-211ENST00000538280 WNK3Q9BYP7 1800 aa11.67□□□□□ -0.54
DDB1-211ENST00000538280 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
DDB1-211ENST00000538280 NUCB1Q02818 461 aa11.67□□□□□ -0.54
DDB1-211ENST00000538280 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
DDB1-211ENST00000538280 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
DDB1-211ENST00000538280 PARP4Q9UKK3 1724 aaKnown RBP11.66□□□□□ -0.54
DDB1-211ENST00000538280 SPATA31A1Q5TZJ5 1347 aa11.66□□□□□ -0.54
DDB1-211ENST00000538280 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
DDB1-211ENST00000538280 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
DDB1-211ENST00000538280 DEKP35659 375 aaKnown RBP11.66□□□□□ -0.54
DDB1-211ENST00000538280 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
DDB1-211ENST00000538280 TRIM37O94972 964 aa11.65□□□□□ -0.54
DDB1-211ENST00000538280 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
DDB1-211ENST00000538280 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
DDB1-211ENST00000538280 CAMKK2Q96RR4 588 aa11.65□□□□□ -0.54
DDB1-211ENST00000538280 PRDM11Q9NQV5 511 aa11.65□□□□□ -0.54
DDB1-211ENST00000538280 NFAT5O94916 1531 aa11.65□□□□□ -0.55
DDB1-211ENST00000538280 LTN1O94822 1766 aa11.64□□□□□ -0.55
DDB1-211ENST00000538280 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
DDB1-211ENST00000538280 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
DDB1-211ENST00000538280 STRN4Q9NRL3 753 aa11.64□□□□□ -0.55
DDB1-211ENST00000538280 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
DDB1-211ENST00000538280 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
DDB1-211ENST00000538280 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
DDB1-211ENST00000538280 SLC4A3P48751 1232 aa11.63□□□□□ -0.55
DDB1-211ENST00000538280 CHD1LQ86WJ1 897 aa11.63□□□□□ -0.55
DDB1-211ENST00000538280 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
DDB1-211ENST00000538280 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
DDB1-211ENST00000538280 PTPRCP08575 1304 aa11.62□□□□□ -0.55
DDB1-211ENST00000538280 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
DDB1-211ENST00000538280 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
DDB1-211ENST00000538280 ZC3H6P61129 1189 aaKnown RBP11.62□□□□□ -0.55
DDB1-211ENST00000538280 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
DDB1-211ENST00000538280 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
DDB1-211ENST00000538280 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
DDB1-211ENST00000538280 BECN1Q14457 450 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 MTHFSDQ2M296 383 aaKnown RBP11.61□□□□□ -0.55
DDB1-211ENST00000538280 MCM10Q7L590 875 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 EYA1Q99502 592 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 RGPD5Q99666 1765 aa11.61□□□□□ -0.55
DDB1-211ENST00000538280 SLIT3O75094 1523 aa11.6□□□□□ -0.55
DDB1-211ENST00000538280 COL18A1P39060 1754 aa11.6□□□□□ -0.55
DDB1-211ENST00000538280 APBA3O96018 575 aa11.6□□□□□ -0.55
DDB1-211ENST00000538280 HOXC9P31274 260 aa11.6□□□□□ -0.55
DDB1-211ENST00000538280 BMP2KLQ5H9B9 411 aa11.6□□□□□ -0.55
DDB1-211ENST00000538280 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
DDB1-211ENST00000538280 COL5A2P05997 1499 aaPredicted RBP11.59□□□□□ -0.55
DDB1-211ENST00000538280 AMPHP49418 695 aa11.59□□□□□ -0.55
DDB1-211ENST00000538280 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
DDB1-211ENST00000538280 NCAPD2Q15021 1401 aa11.59□□□□□ -0.55
DDB1-211ENST00000538280 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
DDB1-211ENST00000538280 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
DDB1-211ENST00000538280 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 C22orf23Q9BZE7 217 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 DCTPP1Q9H773 170 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
DDB1-211ENST00000538280 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
DDB1-211ENST00000538280 NLRP6P59044 892 aa11.57□□□□□ -0.56
DDB1-211ENST00000538280 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
DDB1-211ENST00000538280 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
DDB1-211ENST00000538280 C1orf115Q9H7X2 142 aa11.57□□□□□ -0.56
DDB1-211ENST00000538280 MAP3K5Q99683 1374 aa11.56□□□□□ -0.56
DDB1-211ENST00000538280 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
DDB1-211ENST00000538280 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
DDB1-211ENST00000538280 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
DDB1-211ENST00000538280 CPDO75976 1380 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
DDB1-211ENST00000538280 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
DDB1-211ENST00000538280 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
DDB1-211ENST00000538280 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
DDB1-211ENST00000538280 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
DDB1-211ENST00000538280 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
DDB1-211ENST00000538280 SOX12O15370 315 aa11.54□□□□□ -0.56
DDB1-211ENST00000538280 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
DDB1-211ENST00000538280 IP6K1Q92551 441 aa11.54□□□□□ -0.56
DDB1-211ENST00000538280 PDGFDQ9GZP0 370 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms