RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PBRM1Q86U86 1689 aa13.18□□□□□ -0.3
LINC00346-201ENST00000538077 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
LINC00346-201ENST00000538077 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
LINC00346-201ENST00000538077 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 CENPHQ9H3R5 247 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 AAMPQ13685 434 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 MAP7D2Q96T17 732 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
LINC00346-201ENST00000538077 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
LINC00346-201ENST00000538077 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
LINC00346-201ENST00000538077 CDKL5O76039 1030 aa13.16□□□□□ -0.3
LINC00346-201ENST00000538077 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
LINC00346-201ENST00000538077 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
LINC00346-201ENST00000538077 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
LINC00346-201ENST00000538077 MCM2P49736 904 aa13.16□□□□□ -0.3
LINC00346-201ENST00000538077 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
LINC00346-201ENST00000538077 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
LINC00346-201ENST00000538077 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
LINC00346-201ENST00000538077 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 FANCIQ9NVI1 1328 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 NAIPQ13075 1403 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 FCHSD2O94868 740 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 EXOC5O00471 708 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
LINC00346-201ENST00000538077 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
LINC00346-201ENST00000538077 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 SLC5A1P13866 664 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
LINC00346-201ENST00000538077 KRT85P78386 507 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
LINC00346-201ENST00000538077 TAX1BP1Q86VP1 789 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 RPGRIP1LQ68CZ1 1315 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
LINC00346-201ENST00000538077 NAPBQ9H115 298 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 CA8P35219 290 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
LINC00346-201ENST00000538077 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
LINC00346-201ENST00000538077 TNIP1Q15025 636 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 MRE11P49959 708 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
LINC00346-201ENST00000538077 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
LINC00346-201ENST00000538077 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 MBD3O95983 291 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 FBLN1P23142 703 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
LINC00346-201ENST00000538077 ERLIN2O94905 339 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 RFC4P35249 363 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
LINC00346-201ENST00000538077 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
LINC00346-201ENST00000538077 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
LINC00346-201ENST00000538077 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 KIF14Q15058 1648 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 H0YHG0 523 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 MX1P20591 662 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
LINC00346-201ENST00000538077 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 WASF1Q92558 559 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
LINC00346-201ENST00000538077 C8orf37Q96NL8 207 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
LINC00346-201ENST00000538077 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 TMEM87AQ8NBN3 555 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 CUL5Q93034 780 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 A0A087WZG4 1122 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 CCP110O43303 1012 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 FAM83GA6ND36 823 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
LINC00346-201ENST00000538077 TNNT1P13805 278 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 DNA2P51530 1060 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
LINC00346-201ENST00000538077 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms