RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
CIT-209ENST00000538073 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
CIT-209ENST00000538073 SCN11AQ9UI33 1791 aa10.61□□□□□ -0.71
CIT-209ENST00000538073 A0A0G2JS52 829 aa10.6□□□□□ -0.71
CIT-209ENST00000538073 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
CIT-209ENST00000538073 PDE3BQ13370 1112 aa10.6□□□□□ -0.71
CIT-209ENST00000538073 TOGARAM1Q9Y4F4 1720 aa10.6□□□□□ -0.71
CIT-209ENST00000538073 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
CIT-209ENST00000538073 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
CIT-209ENST00000538073 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
CIT-209ENST00000538073 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
CIT-209ENST00000538073 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
CIT-209ENST00000538073 RIPK4P57078 832 aa10.59□□□□□ -0.71
CIT-209ENST00000538073 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
CIT-209ENST00000538073 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
CIT-209ENST00000538073 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
CIT-209ENST00000538073 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
CIT-209ENST00000538073 CEMIPQ8WUJ3 1361 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
CIT-209ENST00000538073 SBF2Q86WG5 1849 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
CIT-209ENST00000538073 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
CIT-209ENST00000538073 MRC1P22897 1456 aa10.57□□□□□ -0.72
CIT-209ENST00000538073 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
CIT-209ENST00000538073 MPRIPQ6WCQ1 1025 aa10.57□□□□□ -0.72
CIT-209ENST00000538073 IL17REQ8NFR9 667 aa10.57□□□□□ -0.72
CIT-209ENST00000538073 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
CIT-209ENST00000538073 NHSQ6T4R5 1651 aa10.57□□□□□ -0.72
CIT-209ENST00000538073 ITGB4P16144 1822 aa10.56□□□□□ -0.72
CIT-209ENST00000538073 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
CIT-209ENST00000538073 LMOD3Q0VAK6 560 aa10.56□□□□□ -0.72
CIT-209ENST00000538073 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
CIT-209ENST00000538073 ZNF521Q96K83 1311 aa10.56□□□□□ -0.72
CIT-209ENST00000538073 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
CIT-209ENST00000538073 FAM196AQ6ZSG2 479 aa10.55□□□□□ -0.72
CIT-209ENST00000538073 MCM10Q7L590 875 aa10.55□□□□□ -0.72
CIT-209ENST00000538073 RTF1Q92541 710 aaKnown RBP10.55□□□□□ -0.72
CIT-209ENST00000538073 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
CIT-209ENST00000538073 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
CIT-209ENST00000538073 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
CIT-209ENST00000538073 WWC1Q8IX03 1113 aa10.54□□□□□ -0.72
CIT-209ENST00000538073 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
CIT-209ENST00000538073 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
CIT-209ENST00000538073 PAPPAQ13219 1627 aa10.53□□□□□ -0.72
CIT-209ENST00000538073 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 CABP4P57796 275 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 WDR63Q8IWG1 891 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 ACSBG1Q96GR2 724 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 THUMPD2Q9BTF0 503 aaKnown RBP10.52□□□□□ -0.73
CIT-209ENST00000538073 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
CIT-209ENST00000538073 TNS1Q9HBL0 1735 aaKnown RBP10.52□□□□□ -0.73
CIT-209ENST00000538073 IL16Q14005 1332 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 KDM3BQ7LBC6 1761 aa10.52□□□□□ -0.73
CIT-209ENST00000538073 BTAF1O14981 1849 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 KCNQ2O43526 872 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 ZNF853P0CG23 659 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 PRIM1P49642 420 aaKnown RBP10.51□□□□□ -0.73
CIT-209ENST00000538073 CALD1Q05682 793 aaKnown RBP10.51□□□□□ -0.73
CIT-209ENST00000538073 TEFQ10587 303 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
CIT-209ENST00000538073 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
CIT-209ENST00000538073 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 TMOD3Q9NYL9 352 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
CIT-209ENST00000538073 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
CIT-209ENST00000538073 PIGBQ92521 554 aa10.5□□□□□ -0.73
CIT-209ENST00000538073 CFAP44Q96MT7 982 aa10.5□□□□□ -0.73
CIT-209ENST00000538073 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
CIT-209ENST00000538073 CHL1O00533 1208 aa10.49□□□□□ -0.73
CIT-209ENST00000538073 GNAI1P63096 354 aa10.49□□□□□ -0.73
CIT-209ENST00000538073 PTF1AQ7RTS3 328 aa10.49□□□□□ -0.73
CIT-209ENST00000538073 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
CIT-209ENST00000538073 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
CIT-209ENST00000538073 EP400Q96L91 3159 aa10.49□□□□□ -0.73
CIT-209ENST00000538073 KAT6BQ8WYB5 2073 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 LY75O60449 1722 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
CIT-209ENST00000538073 RGPD4Q7Z3J3 1758 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 BTBD11A6QL63 1104 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 TRIM37O94972 964 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
CIT-209ENST00000538073 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
CIT-209ENST00000538073 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
CIT-209ENST00000538073 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
CIT-209ENST00000538073 ZNF790Q6PG37 636 aa10.47□□□□□ -0.73
CIT-209ENST00000538073 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
CIT-209ENST00000538073 ATG3Q9NT62 314 aa10.47□□□□□ -0.73
CIT-209ENST00000538073 ASAP1Q9ULH1 1129 aa10.47□□□□□ -0.73
CIT-209ENST00000538073 E9PSI1 815 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 CLCN6P51797 869 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 SLC39A6Q13433 755 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 SMARCC1Q92922 1105 aaPredicted RBP10.46□□□□□ -0.73
CIT-209ENST00000538073 DCBLD2Q96PD2 775 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
CIT-209ENST00000538073 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms