RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 TEFQ10587 303 aa16.15■□□□□ 0.18
LMO3-219ENST00000538051 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
LMO3-219ENST00000538051 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
LMO3-219ENST00000538051 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
LMO3-219ENST00000538051 TAF7Q15545 349 aaPredicted RBP16.14■□□□□ 0.17
LMO3-219ENST00000538051 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
LMO3-219ENST00000538051 CHL1O00533 1208 aa16.13■□□□□ 0.17
LMO3-219ENST00000538051 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
LMO3-219ENST00000538051 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
LMO3-219ENST00000538051 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
LMO3-219ENST00000538051 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
LMO3-219ENST00000538051 MCM10Q7L590 875 aa16.11■□□□□ 0.17
LMO3-219ENST00000538051 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
LMO3-219ENST00000538051 LRP5O75197 1615 aa16.1■□□□□ 0.17
LMO3-219ENST00000538051 TRIM37O94972 964 aa16.1■□□□□ 0.17
LMO3-219ENST00000538051 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
LMO3-219ENST00000538051 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
LMO3-219ENST00000538051 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
LMO3-219ENST00000538051 HOXB7P09629 217 aa16.08■□□□□ 0.16
LMO3-219ENST00000538051 DCTN1Q14203 1278 aa16.08■□□□□ 0.16
LMO3-219ENST00000538051 EZH2Q15910 746 aaKnown RBP16.08■□□□□ 0.16
LMO3-219ENST00000538051 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
LMO3-219ENST00000538051 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
LMO3-219ENST00000538051 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
LMO3-219ENST00000538051 CABP4P57796 275 aa16.07■□□□□ 0.16
LMO3-219ENST00000538051 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
LMO3-219ENST00000538051 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
LMO3-219ENST00000538051 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
LMO3-219ENST00000538051 ITGB4P16144 1822 aa16.07■□□□□ 0.16
LMO3-219ENST00000538051 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
LMO3-219ENST00000538051 BTBD11A6QL63 1104 aa16.06■□□□□ 0.16
LMO3-219ENST00000538051 APBA3O96018 575 aa16.06■□□□□ 0.16
LMO3-219ENST00000538051 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
LMO3-219ENST00000538051 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
LMO3-219ENST00000538051 MBIPQ9NS73 344 aa16.06■□□□□ 0.16
LMO3-219ENST00000538051 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
LMO3-219ENST00000538051 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
LMO3-219ENST00000538051 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
LMO3-219ENST00000538051 MARCH10Q8NA82 808 aaPredicted RBP16.05■□□□□ 0.16
LMO3-219ENST00000538051 TMOD3Q9NYL9 352 aa16.05■□□□□ 0.16
LMO3-219ENST00000538051 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
LMO3-219ENST00000538051 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
LMO3-219ENST00000538051 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
LMO3-219ENST00000538051 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
LMO3-219ENST00000538051 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
LMO3-219ENST00000538051 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
LMO3-219ENST00000538051 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
LMO3-219ENST00000538051 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.16
LMO3-219ENST00000538051 SENP3-EIF4A1A0A087X0R7 540 aa16.02■□□□□ 0.16
LMO3-219ENST00000538051 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.16
LMO3-219ENST00000538051 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.16
LMO3-219ENST00000538051 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
LMO3-219ENST00000538051 SBF2Q86WG5 1849 aa16.01■□□□□ 0.15
LMO3-219ENST00000538051 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
LMO3-219ENST00000538051 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
LMO3-219ENST00000538051 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
LMO3-219ENST00000538051 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
LMO3-219ENST00000538051 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
LMO3-219ENST00000538051 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
LMO3-219ENST00000538051 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
LMO3-219ENST00000538051 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
LMO3-219ENST00000538051 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
LMO3-219ENST00000538051 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
LMO3-219ENST00000538051 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
LMO3-219ENST00000538051 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
LMO3-219ENST00000538051 LAMB4A4D0S4 1761 aa15.99■□□□□ 0.15
LMO3-219ENST00000538051 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
LMO3-219ENST00000538051 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
LMO3-219ENST00000538051 VAMP4O75379 141 aa15.97■□□□□ 0.15
LMO3-219ENST00000538051 PIGBQ92521 554 aa15.97■□□□□ 0.15
LMO3-219ENST00000538051 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
LMO3-219ENST00000538051 KIF16BQ96L93 1317 aa15.96■□□□□ 0.15
LMO3-219ENST00000538051 SNRPA1P09661 255 aaKnown RBP15.96■□□□□ 0.15
LMO3-219ENST00000538051 PRIM1P49642 420 aaKnown RBP15.96■□□□□ 0.15
LMO3-219ENST00000538051 RNF123Q5XPI4 1314 aa15.95■□□□□ 0.14
LMO3-219ENST00000538051 GIGYF1O75420 1035 aaPredicted RBP15.95■□□□□ 0.14
LMO3-219ENST00000538051 RARSP54136 660 aaKnown RBP15.95■□□□□ 0.14
LMO3-219ENST00000538051 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
LMO3-219ENST00000538051 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
LMO3-219ENST00000538051 BTAF1O14981 1849 aa15.94■□□□□ 0.14
LMO3-219ENST00000538051 MS4A1P11836 297 aa15.94■□□□□ 0.14
LMO3-219ENST00000538051 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
LMO3-219ENST00000538051 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
LMO3-219ENST00000538051 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
LMO3-219ENST00000538051 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
LMO3-219ENST00000538051 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
LMO3-219ENST00000538051 SYTL4Q96C24 671 aaPredicted RBP15.93■□□□□ 0.14
LMO3-219ENST00000538051 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
LMO3-219ENST00000538051 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
LMO3-219ENST00000538051 IPO8O15397 1037 aaKnown RBP15.92■□□□□ 0.14
LMO3-219ENST00000538051 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
LMO3-219ENST00000538051 ZNF496Q96IT1 587 aaPredicted RBP15.92■□□□□ 0.14
LMO3-219ENST00000538051 LY75O60449 1722 aa15.91■□□□□ 0.14
LMO3-219ENST00000538051 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
LMO3-219ENST00000538051 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
LMO3-219ENST00000538051 PTPRCP08575 1304 aa15.91■□□□□ 0.14
LMO3-219ENST00000538051 PALLDQ8WX93 1383 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 C5P01031 1676 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 STARD3NLO95772 234 aa15.9■□□□□ 0.14
LMO3-219ENST00000538051 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms