RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
PTPRR-205ENST00000537619 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
PTPRR-205ENST00000537619 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
PTPRR-205ENST00000537619 MST1RQ04912 1400 aa11.63□□□□□ -0.55
PTPRR-205ENST00000537619 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
PTPRR-205ENST00000537619 KIF2CQ99661 725 aa11.62□□□□□ -0.55
PTPRR-205ENST00000537619 SOS1Q07889 1333 aaPredicted RBP11.62□□□□□ -0.55
PTPRR-205ENST00000537619 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
PTPRR-205ENST00000537619 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
PTPRR-205ENST00000537619 TTC22Q5TAA0 569 aa11.62□□□□□ -0.55
PTPRR-205ENST00000537619 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
PTPRR-205ENST00000537619 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
PTPRR-205ENST00000537619 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
PTPRR-205ENST00000537619 PHAXQ9H814 394 aaKnown RBP11.61□□□□□ -0.55
PTPRR-205ENST00000537619 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
PTPRR-205ENST00000537619 APBB1O00213 710 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 HDGFL1Q5TGJ6 251 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 BCL11AQ9H165 835 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 C19orf44Q9H6X5 657 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 RGPD5Q99666 1765 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
PTPRR-205ENST00000537619 PNMA6EA0A0J9YXQ4 647 aa11.59□□□□□ -0.55
PTPRR-205ENST00000537619 RNMTO43148 476 aaKnown RBP11.59□□□□□ -0.55
PTPRR-205ENST00000537619 CDC45O75419 566 aa11.59□□□□□ -0.55
PTPRR-205ENST00000537619 GNAI2P04899 355 aa11.59□□□□□ -0.55
PTPRR-205ENST00000537619 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
PTPRR-205ENST00000537619 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.55
PTPRR-205ENST00000537619 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 EIF2S2P20042 333 aaKnown RBP11.58□□□□□ -0.56
PTPRR-205ENST00000537619 USP44Q9H0E7 712 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.56
PTPRR-205ENST00000537619 ERBB3P21860 1342 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
PTPRR-205ENST00000537619 ANXA1P04083 346 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 SDSP20132 328 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
PTPRR-205ENST00000537619 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 LRRFIP2Q9Y608 721 aaKnown RBP11.57□□□□□ -0.56
PTPRR-205ENST00000537619 SIPA1L3O60292 1781 aaPredicted RBP11.57□□□□□ -0.56
PTPRR-205ENST00000537619 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 COL18A1P39060 1754 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 LMTK3Q96Q04 1460 aa11.57□□□□□ -0.56
PTPRR-205ENST00000537619 HMMRO75330 724 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 GNAI3P08754 354 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 HOXB7P09629 217 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 SNX21Q969T3 373 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 DCCP43146 1447 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 HEG1Q9ULI3 1381 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 BTBD11A6QL63 1104 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 TEFQ10587 303 aa11.56□□□□□ -0.56
PTPRR-205ENST00000537619 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
PTPRR-205ENST00000537619 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 ADCY9O60503 1353 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 DDIT3P35638 169 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 TSHZ3Q63HK5 1081 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
PTPRR-205ENST00000537619 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
PTPRR-205ENST00000537619 PDE1AP54750 535 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 PROSER3Q2NL68 480 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 MEGF6O75095 1541 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
PTPRR-205ENST00000537619 ATF3P18847 181 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 HSPA2P54652 639 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
PTPRR-205ENST00000537619 TNS3Q68CZ2 1445 aa11.53□□□□□ -0.56
PTPRR-205ENST00000537619 PI4KAP2A4QPH2 592 aa11.53□□□□□ -0.56
PTPRR-205ENST00000537619 PI4KAP1Q8N8J0 262 aa11.53□□□□□ -0.56
PTPRR-205ENST00000537619 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
PTPRR-205ENST00000537619 XIRP1Q702N8 1843 aaKnown RBP11.53□□□□□ -0.56
PTPRR-205ENST00000537619 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.56
PTPRR-205ENST00000537619 UBTFL1P0CB47 393 aaPredicted RBP11.52□□□□□ -0.56
PTPRR-205ENST00000537619 SSH3Q8TE77 659 aa11.52□□□□□ -0.56
PTPRR-205ENST00000537619 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.56
PTPRR-205ENST00000537619 USP26Q9BXU7 913 aa11.52□□□□□ -0.56
PTPRR-205ENST00000537619 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.56
PTPRR-205ENST00000537619 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.57
PTPRR-205ENST00000537619 POLA2Q14181 598 aa11.52□□□□□ -0.57
PTPRR-205ENST00000537619 GSE1Q14687 1217 aa11.51□□□□□ -0.57
PTPRR-205ENST00000537619 CHRNA2Q15822 529 aa11.51□□□□□ -0.57
PTPRR-205ENST00000537619 LRRCC1Q9C099 1032 aa11.51□□□□□ -0.57
PTPRR-205ENST00000537619 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
PTPRR-205ENST00000537619 C5P01031 1676 aa11.51□□□□□ -0.57
PTPRR-205ENST00000537619 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 CHMP4AQ9BY43 222 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 NLRP2Q9NX02 1062 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 ABCC6O95255 1503 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 SCN11AQ9UI33 1791 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms