RNA–Protein interactions for RNA: ENST00000537460.5

RAP1B-216, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAP1B, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-216ENST00000537460 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
RAP1B-216ENST00000537460 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
RAP1B-216ENST00000537460 U3KPZ7 1027 aaPredicted RBP18.53■□□□□ 0.56
RAP1B-216ENST00000537460 PALLDQ8WX93 1383 aa18.53■□□□□ 0.56
RAP1B-216ENST00000537460 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
RAP1B-216ENST00000537460 PIGBQ92521 554 aa18.52■□□□□ 0.56
RAP1B-216ENST00000537460 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
RAP1B-216ENST00000537460 KCNQ4P56696 695 aa18.51■□□□□ 0.55
RAP1B-216ENST00000537460 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
RAP1B-216ENST00000537460 AEBP1Q8IUX7 1158 aa18.51■□□□□ 0.55
RAP1B-216ENST00000537460 COL24A1Q17RW2 1714 aa18.5■□□□□ 0.55
RAP1B-216ENST00000537460 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
RAP1B-216ENST00000537460 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
RAP1B-216ENST00000537460 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
RAP1B-216ENST00000537460 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
RAP1B-216ENST00000537460 ITGB4P16144 1822 aa18.5■□□□□ 0.55
RAP1B-216ENST00000537460 GOLGB1Q14789 3259 aaKnown RBP18.49■□□□□ 0.55
RAP1B-216ENST00000537460 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
RAP1B-216ENST00000537460 HSPA6P17066 643 aa18.49■□□□□ 0.55
RAP1B-216ENST00000537460 DIAPH1O60610 1272 aaKnown RBP18.47■□□□□ 0.55
RAP1B-216ENST00000537460 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
RAP1B-216ENST00000537460 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
RAP1B-216ENST00000537460 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
RAP1B-216ENST00000537460 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
RAP1B-216ENST00000537460 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
RAP1B-216ENST00000537460 SIK1P57059 783 aa18.44■□□□□ 0.54
RAP1B-216ENST00000537460 COL23A1Q86Y22 540 aaPredicted RBP18.44■□□□□ 0.54
RAP1B-216ENST00000537460 C5P01031 1676 aa18.44■□□□□ 0.54
RAP1B-216ENST00000537460 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
RAP1B-216ENST00000537460 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
RAP1B-216ENST00000537460 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
RAP1B-216ENST00000537460 ATG3Q9NT62 314 aa18.43■□□□□ 0.54
RAP1B-216ENST00000537460 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
RAP1B-216ENST00000537460 MSL1Q68DK7 614 aa18.42■□□□□ 0.54
RAP1B-216ENST00000537460 CD2APQ9Y5K6 639 aa18.42■□□□□ 0.54
RAP1B-216ENST00000537460 ADCY9O60503 1353 aa18.42■□□□□ 0.54
RAP1B-216ENST00000537460 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
RAP1B-216ENST00000537460 RNF39Q9H2S5 420 aa18.41■□□□□ 0.54
RAP1B-216ENST00000537460 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
RAP1B-216ENST00000537460 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
RAP1B-216ENST00000537460 HMOX1P09601 288 aa18.4■□□□□ 0.54
RAP1B-216ENST00000537460 CABP4P57796 275 aa18.4■□□□□ 0.54
RAP1B-216ENST00000537460 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
RAP1B-216ENST00000537460 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
RAP1B-216ENST00000537460 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
RAP1B-216ENST00000537460 AK7Q96M32 723 aa18.38■□□□□ 0.53
RAP1B-216ENST00000537460 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
RAP1B-216ENST00000537460 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
RAP1B-216ENST00000537460 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
RAP1B-216ENST00000537460 ITPK1Q13572 414 aa18.37■□□□□ 0.53
RAP1B-216ENST00000537460 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
RAP1B-216ENST00000537460 SSFA2P28290 1259 aa18.36■□□□□ 0.53
RAP1B-216ENST00000537460 NFATC2IPQ8NCF5 419 aa18.36■□□□□ 0.53
RAP1B-216ENST00000537460 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
RAP1B-216ENST00000537460 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
RAP1B-216ENST00000537460 MRC1P22897 1456 aa18.34■□□□□ 0.53
RAP1B-216ENST00000537460 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
RAP1B-216ENST00000537460 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
RAP1B-216ENST00000537460 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
RAP1B-216ENST00000537460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.52
RAP1B-216ENST00000537460 KIF3CO14782 793 aa18.33■□□□□ 0.52
RAP1B-216ENST00000537460 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
RAP1B-216ENST00000537460 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
RAP1B-216ENST00000537460 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.52
RAP1B-216ENST00000537460 ADAMTS7Q9UKP4 1686 aa18.32■□□□□ 0.52
RAP1B-216ENST00000537460 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
RAP1B-216ENST00000537460 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
RAP1B-216ENST00000537460 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
RAP1B-216ENST00000537460 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
RAP1B-216ENST00000537460 RBM42Q9BTD8 480 aaKnown RBP18.32■□□□□ 0.52
RAP1B-216ENST00000537460 CNTNAP4Q9C0A0 1308 aa18.31■□□□□ 0.52
RAP1B-216ENST00000537460 GNPATO15228 680 aa18.31■□□□□ 0.52
RAP1B-216ENST00000537460 APLP1P51693 650 aa18.31■□□□□ 0.52
RAP1B-216ENST00000537460 LGR6Q9HBX8 967 aa18.31■□□□□ 0.52
RAP1B-216ENST00000537460 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
RAP1B-216ENST00000537460 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
RAP1B-216ENST00000537460 PHF14O94880 888 aa18.29■□□□□ 0.52
RAP1B-216ENST00000537460 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
RAP1B-216ENST00000537460 CICQ96RK0 1608 aaPredicted RBP18.29■□□□□ 0.52
RAP1B-216ENST00000537460 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
RAP1B-216ENST00000537460 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
RAP1B-216ENST00000537460 FCHSD2O94868 740 aa18.28■□□□□ 0.52
RAP1B-216ENST00000537460 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
RAP1B-216ENST00000537460 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
RAP1B-216ENST00000537460 DNAJC5GQ8N7S2 189 aa18.28■□□□□ 0.52
RAP1B-216ENST00000537460 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
RAP1B-216ENST00000537460 COL5A3P25940 1745 aaPredicted RBP18.28■□□□□ 0.52
RAP1B-216ENST00000537460 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
RAP1B-216ENST00000537460 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.521e-8■■■□□ 16.3
RAP1B-216ENST00000537460 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
RAP1B-216ENST00000537460 RPS6KA4O75676 772 aa18.25■□□□□ 0.51
RAP1B-216ENST00000537460 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
RAP1B-216ENST00000537460 TOMM70O94826 608 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 RALBP1Q15311 655 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 SMIM5Q71RC9 77 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
RAP1B-216ENST00000537460 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
RAP1B-216ENST00000537460 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms