RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SEC24BO95487 1268 aa16.9■□□□□ 0.3
SMG6-203ENST00000536871 GNAI2P04899 355 aa16.9■□□□□ 0.3
SMG6-203ENST00000536871 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
SMG6-203ENST00000536871 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
SMG6-203ENST00000536871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMG6-203ENST00000536871 ERBB3P21860 1342 aa16.9■□□□□ 0.3
SMG6-203ENST00000536871 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
SMG6-203ENST00000536871 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
SMG6-203ENST00000536871 XPCQ01831 940 aaPredicted RBP16.89■□□□□ 0.29
SMG6-203ENST00000536871 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
SMG6-203ENST00000536871 MEIS3Q99687 375 aa16.88■□□□□ 0.29
SMG6-203ENST00000536871 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
SMG6-203ENST00000536871 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
SMG6-203ENST00000536871 G2E3Q7L622 706 aa16.88■□□□□ 0.29
SMG6-203ENST00000536871 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
SMG6-203ENST00000536871 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
SMG6-203ENST00000536871 HDAC5Q9UQL6 1122 aa16.87■□□□□ 0.29
SMG6-203ENST00000536871 CPDO75976 1380 aa16.87■□□□□ 0.29
SMG6-203ENST00000536871 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
SMG6-203ENST00000536871 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
SMG6-203ENST00000536871 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
SMG6-203ENST00000536871 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
SMG6-203ENST00000536871 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
SMG6-203ENST00000536871 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
SMG6-203ENST00000536871 CDC45O75419 566 aa16.84■□□□□ 0.29
SMG6-203ENST00000536871 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
SMG6-203ENST00000536871 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
SMG6-203ENST00000536871 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
SMG6-203ENST00000536871 PXDNQ92626 1479 aa16.84■□□□□ 0.29
SMG6-203ENST00000536871 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
SMG6-203ENST00000536871 DBF4Q9UBU7 674 aaPredicted RBP16.84■□□□□ 0.29
SMG6-203ENST00000536871 STRCP1A6NGW2 1772 aa16.83■□□□□ 0.29
SMG6-203ENST00000536871 F6X3S4 739 aa16.83■□□□□ 0.28
SMG6-203ENST00000536871 PLEKHM2Q8IWE5 1019 aa16.83■□□□□ 0.28
SMG6-203ENST00000536871 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.28
SMG6-203ENST00000536871 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
SMG6-203ENST00000536871 NBR1Q14596 966 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 MPRIPQ6WCQ1 1025 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 SRCIN1Q9C0H9 1055 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 OSBPL3Q9H4L5 887 aa16.82■□□□□ 0.28
SMG6-203ENST00000536871 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
SMG6-203ENST00000536871 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
SMG6-203ENST00000536871 IBTKQ9P2D0 1353 aaPredicted RBP16.8■□□□□ 0.28
SMG6-203ENST00000536871 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
SMG6-203ENST00000536871 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
SMG6-203ENST00000536871 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
SMG6-203ENST00000536871 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
SMG6-203ENST00000536871 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
SMG6-203ENST00000536871 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
SMG6-203ENST00000536871 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 EIF2S2P20042 333 aaKnown RBP16.78■□□□□ 0.28
SMG6-203ENST00000536871 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 SNX21Q969T3 373 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 COL18A1P39060 1754 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 RAB11FIP3O75154 756 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 ALDH1L1O75891 902 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
SMG6-203ENST00000536871 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
SMG6-203ENST00000536871 HSPA2P54652 639 aa16.77■□□□□ 0.27
SMG6-203ENST00000536871 HSP90AB4PQ58FF6 505 aa16.77■□□□□ 0.27
SMG6-203ENST00000536871 HSCBQ8IWL3 235 aa16.77■□□□□ 0.27
SMG6-203ENST00000536871 NECTIN2Q92692 538 aa16.77■□□□□ 0.27
SMG6-203ENST00000536871 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.27
SMG6-203ENST00000536871 AOX1Q06278 1338 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 PHKG2P15735 406 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 SOS2Q07890 1332 aaPredicted RBP16.76■□□□□ 0.27
SMG6-203ENST00000536871 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
SMG6-203ENST00000536871 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
SMG6-203ENST00000536871 CRYBG1Q9Y4K1 1723 aa16.75■□□□□ 0.27
SMG6-203ENST00000536871 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
SMG6-203ENST00000536871 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
SMG6-203ENST00000536871 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
SMG6-203ENST00000536871 KSR2Q6VAB6 950 aa16.74■□□□□ 0.27
SMG6-203ENST00000536871 DDX21Q9NR30 783 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMG6-203ENST00000536871 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
SMG6-203ENST00000536871 MRC1P22897 1456 aa16.74■□□□□ 0.27
SMG6-203ENST00000536871 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 KCNQ3O43525 872 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 SLAIN2Q9P270 581 aa16.73■□□□□ 0.27
SMG6-203ENST00000536871 REC8O95072 547 aa16.72■□□□□ 0.27
SMG6-203ENST00000536871 PDE1AP54750 535 aa16.72■□□□□ 0.27
SMG6-203ENST00000536871 POLA2Q14181 598 aa16.72■□□□□ 0.27
SMG6-203ENST00000536871 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 MTX1Q13505 466 aa16.71■□□□□ 0.27
SMG6-203ENST00000536871 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms