RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 ERVV-2B6SEH9 535 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 RALBP1Q15311 655 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 TMOD3Q9NYL9 352 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
RFX4-205ENST00000536722 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
RFX4-205ENST00000536722 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
RFX4-205ENST00000536722 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
RFX4-205ENST00000536722 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
RFX4-205ENST00000536722 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
RFX4-205ENST00000536722 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
RFX4-205ENST00000536722 C4BP0C0L5 1744 aa15.28■□□□□ 0.04
RFX4-205ENST00000536722 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
RFX4-205ENST00000536722 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.04
RFX4-205ENST00000536722 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
RFX4-205ENST00000536722 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
RFX4-205ENST00000536722 STK32BQ9NY57 414 aa15.27■□□□□ 0.04
RFX4-205ENST00000536722 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
RFX4-205ENST00000536722 CICQ96RK0 1608 aaPredicted RBP15.26■□□□□ 0.03
RFX4-205ENST00000536722 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
RFX4-205ENST00000536722 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
RFX4-205ENST00000536722 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
RFX4-205ENST00000536722 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
RFX4-205ENST00000536722 TJP1Q07157 1748 aa15.26■□□□□ 0.03
RFX4-205ENST00000536722 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
RFX4-205ENST00000536722 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
RFX4-205ENST00000536722 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
RFX4-205ENST00000536722 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
RFX4-205ENST00000536722 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
RFX4-205ENST00000536722 PNPLA7Q6ZV29 1317 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 FCHSD2O94868 740 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 SIK1P57059 783 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 ITPK1Q13572 414 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 AMIGO3Q86WK7 504 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
RFX4-205ENST00000536722 CABP4P57796 275 aa15.23■□□□□ 0.03
RFX4-205ENST00000536722 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
RFX4-205ENST00000536722 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
RFX4-205ENST00000536722 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
RFX4-205ENST00000536722 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
RFX4-205ENST00000536722 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
RFX4-205ENST00000536722 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
RFX4-205ENST00000536722 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
RFX4-205ENST00000536722 ZBTB7AO95365 584 aa15.2■□□□□ 0.02
RFX4-205ENST00000536722 PTGER2P43116 358 aa15.2■□□□□ 0.02
RFX4-205ENST00000536722 SMIM5Q71RC9 77 aa15.2■□□□□ 0.02
RFX4-205ENST00000536722 SGIP1Q9BQI5 828 aa15.2■□□□□ 0.02
RFX4-205ENST00000536722 GNAT3A8MTJ3 354 aa15.19■□□□□ 0.02
RFX4-205ENST00000536722 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
RFX4-205ENST00000536722 ATP6V1AP38606 617 aa15.18■□□□□ 0.02
RFX4-205ENST00000536722 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
RFX4-205ENST00000536722 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
RFX4-205ENST00000536722 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
RFX4-205ENST00000536722 PTCD1O75127 700 aaKnown RBP15.17■□□□□ 0.02
RFX4-205ENST00000536722 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
RFX4-205ENST00000536722 SPON1Q9HCB6 807 aa15.17■□□□□ 0.02
RFX4-205ENST00000536722 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
RFX4-205ENST00000536722 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
RFX4-205ENST00000536722 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
RFX4-205ENST00000536722 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
RFX4-205ENST00000536722 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
RFX4-205ENST00000536722 MCM10Q7L590 875 aa15.15■□□□□ 0.02
RFX4-205ENST00000536722 KDM3BQ7LBC6 1761 aa15.14■□□□□ 0.01
RFX4-205ENST00000536722 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
RFX4-205ENST00000536722 KCNQ3O43525 872 aa15.13■□□□□ 0.01
RFX4-205ENST00000536722 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
RFX4-205ENST00000536722 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
RFX4-205ENST00000536722 AK7Q96M32 723 aa15.13■□□□□ 0.01
RFX4-205ENST00000536722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.12■□□□□ 0.01
RFX4-205ENST00000536722 DNAJC10Q8IXB1 793 aa15.12■□□□□ 0.01
RFX4-205ENST00000536722 SLC16A10Q8TF71 515 aa15.12■□□□□ 0.01
RFX4-205ENST00000536722 GNPATO15228 680 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
RFX4-205ENST00000536722 PHF14O94880 888 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 SSFA2P28290 1259 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 TEFQ10587 303 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
RFX4-205ENST00000536722 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
RFX4-205ENST00000536722 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
RFX4-205ENST00000536722 CRKLP46109 303 aaKnown RBP15.1■□□□□ 0.01
RFX4-205ENST00000536722 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
RFX4-205ENST00000536722 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
RFX4-205ENST00000536722 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
RFX4-205ENST00000536722 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
RFX4-205ENST00000536722 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
RFX4-205ENST00000536722 MSL1Q68DK7 614 aa15.09■□□□□ 0.01
RFX4-205ENST00000536722 HEG1Q9ULI3 1381 aa15.09■□□□□ 0.01
RFX4-205ENST00000536722 RPS6KA4O75676 772 aa15.08■□□□□ 0
RFX4-205ENST00000536722 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
RFX4-205ENST00000536722 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0
RFX4-205ENST00000536722 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
RFX4-205ENST00000536722 FLAD1Q8NFF5 587 aa15.08■□□□□ 0
RFX4-205ENST00000536722 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
RFX4-205ENST00000536722 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
RFX4-205ENST00000536722 BTBD11A6QL63 1104 aa15.07■□□□□ 0
RFX4-205ENST00000536722 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms