RNA–Protein interactions for RNA: ENST00000536610.5

CD4-207, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 608 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-207ENST00000536610 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
CD4-207ENST00000536610 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
CD4-207ENST00000536610 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
CD4-207ENST00000536610 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
CD4-207ENST00000536610 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
CD4-207ENST00000536610 ITPK1Q13572 414 aa13.03□□□□□ -0.32
CD4-207ENST00000536610 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
CD4-207ENST00000536610 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
CD4-207ENST00000536610 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
CD4-207ENST00000536610 PHF14O94880 888 aa13.02□□□□□ -0.33
CD4-207ENST00000536610 AK7Q96M32 723 aa13.02□□□□□ -0.33
CD4-207ENST00000536610 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
CD4-207ENST00000536610 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
CD4-207ENST00000536610 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.33
CD4-207ENST00000536610 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
CD4-207ENST00000536610 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
CD4-207ENST00000536610 NEFMP07197 916 aa13.01□□□□□ -0.33
CD4-207ENST00000536610 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
CD4-207ENST00000536610 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
CD4-207ENST00000536610 PNPLA7Q6ZV29 1317 aa13.01□□□□□ -0.33
CD4-207ENST00000536610 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
CD4-207ENST00000536610 PAPPAQ13219 1627 aa13.01□□□□□ -0.33
CD4-207ENST00000536610 TEFQ10587 303 aa13□□□□□ -0.33
CD4-207ENST00000536610 MCM10Q7L590 875 aa13□□□□□ -0.33
CD4-207ENST00000536610 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
CD4-207ENST00000536610 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
CD4-207ENST00000536610 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
CD4-207ENST00000536610 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
CD4-207ENST00000536610 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 GNPATO15228 680 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 C5P01031 1676 aa12.98□□□□□ -0.33
CD4-207ENST00000536610 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
CD4-207ENST00000536610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
CD4-207ENST00000536610 KCNQ3O43525 872 aa12.97□□□□□ -0.33
CD4-207ENST00000536610 PTGER2P43116 358 aa12.97□□□□□ -0.33
CD4-207ENST00000536610 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
CD4-207ENST00000536610 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
CD4-207ENST00000536610 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CD4-207ENST00000536610 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
CD4-207ENST00000536610 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
CD4-207ENST00000536610 THUMPD2Q9BTF0 503 aaKnown RBP12.96□□□□□ -0.33
CD4-207ENST00000536610 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
CD4-207ENST00000536610 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
CD4-207ENST00000536610 RRP7AQ9Y3A4 280 aaKnown RBP12.96□□□□□ -0.33
CD4-207ENST00000536610 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
CD4-207ENST00000536610 LRP5O75197 1615 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 BTBD11A6QL63 1104 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 ANP32CO43423 234 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
CD4-207ENST00000536610 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
CD4-207ENST00000536610 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
CD4-207ENST00000536610 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
CD4-207ENST00000536610 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
CD4-207ENST00000536610 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
CD4-207ENST00000536610 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 POLD1P28340 1107 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
CD4-207ENST00000536610 RIPK4P57078 832 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
CD4-207ENST00000536610 ARXQ96QS3 562 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
CD4-207ENST00000536610 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
CD4-207ENST00000536610 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
CD4-207ENST00000536610 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
CD4-207ENST00000536610 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
CD4-207ENST00000536610 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
CD4-207ENST00000536610 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
CD4-207ENST00000536610 MRC1P22897 1456 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
CD4-207ENST00000536610 SSFA2P28290 1259 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 RFC4P35249 363 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 TMPOP42166 694 aaKnown RBP12.91□□□□□ -0.34
CD4-207ENST00000536610 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
CD4-207ENST00000536610 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
CD4-207ENST00000536610 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
CD4-207ENST00000536610 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
CD4-207ENST00000536610 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
CD4-207ENST00000536610 CYP19A1P11511 503 aaPredicted RBP12.9□□□□□ -0.34
CD4-207ENST00000536610 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
CD4-207ENST00000536610 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
CD4-207ENST00000536610 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
CD4-207ENST00000536610 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
CD4-207ENST00000536610 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
CD4-207ENST00000536610 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
CD4-207ENST00000536610 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
CD4-207ENST00000536610 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
CD4-207ENST00000536610 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
CD4-207ENST00000536610 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
CD4-207ENST00000536610 TJP1Q07157 1748 aa12.88□□□□□ -0.35
CD4-207ENST00000536610 STARD3NLO95772 234 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms