RNA–Protein interactions for RNA: ENST00000536563.1

CD4-205, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-205ENST00000536563 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
CD4-205ENST00000536563 LY75O60449 1722 aa20.22■□□□□ 0.83
CD4-205ENST00000536563 PRKRIP1Q9H875 184 aaPredicted RBP20.21■□□□□ 0.83
CD4-205ENST00000536563 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
CD4-205ENST00000536563 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
CD4-205ENST00000536563 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
CD4-205ENST00000536563 RBM42Q9BTD8 480 aaKnown RBP20.2■□□□□ 0.82
CD4-205ENST00000536563 PAPPAQ13219 1627 aa20.19■□□□□ 0.82
CD4-205ENST00000536563 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
CD4-205ENST00000536563 PDGFDQ9GZP0 370 aaPredicted RBP20.18■□□□□ 0.82
CD4-205ENST00000536563 TEFQ10587 303 aa20.17■□□□□ 0.82
CD4-205ENST00000536563 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
CD4-205ENST00000536563 AK7Q96M32 723 aa20.17■□□□□ 0.82
CD4-205ENST00000536563 MSH5O43196 834 aa20.16■□□□□ 0.82
CD4-205ENST00000536563 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
CD4-205ENST00000536563 FLAD1Q8NFF5 587 aa20.16■□□□□ 0.82
CD4-205ENST00000536563 ITPK1Q13572 414 aa20.15■□□□□ 0.82
CD4-205ENST00000536563 IL17REQ8NFR9 667 aa20.15■□□□□ 0.82
CD4-205ENST00000536563 SLC16A10Q8TF71 515 aa20.15■□□□□ 0.82
CD4-205ENST00000536563 MTFR1LQ9H019 292 aa20.15■□□□□ 0.82
CD4-205ENST00000536563 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
CD4-205ENST00000536563 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
CD4-205ENST00000536563 PNPLA7Q6ZV29 1317 aa20.15■□□□□ 0.82
CD4-205ENST00000536563 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
CD4-205ENST00000536563 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
CD4-205ENST00000536563 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.81
CD4-205ENST00000536563 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
CD4-205ENST00000536563 HTATSF1O43719 755 aaKnown RBP20.13■□□□□ 0.81
CD4-205ENST00000536563 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
CD4-205ENST00000536563 MRC1P22897 1456 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 C5P01031 1676 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
CD4-205ENST00000536563 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 SLC4A9Q96Q91 983 aa20.11■□□□□ 0.81
CD4-205ENST00000536563 GNPATO15228 680 aa20.1■□□□□ 0.81
CD4-205ENST00000536563 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
CD4-205ENST00000536563 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
CD4-205ENST00000536563 ANP32CO43423 234 aa20.09■□□□□ 0.81
CD4-205ENST00000536563 MCM10Q7L590 875 aa20.09■□□□□ 0.81
CD4-205ENST00000536563 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.81
CD4-205ENST00000536563 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
CD4-205ENST00000536563 PHF14O94880 888 aa20.08■□□□□ 0.81
CD4-205ENST00000536563 SSFA2P28290 1259 aa20.08■□□□□ 0.81
CD4-205ENST00000536563 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
CD4-205ENST00000536563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
CD4-205ENST00000536563 BTBD11A6QL63 1104 aa20.07■□□□□ 0.8
CD4-205ENST00000536563 POLD1P28340 1107 aa20.07■□□□□ 0.8
CD4-205ENST00000536563 PTGER2P43116 358 aa20.07■□□□□ 0.8
CD4-205ENST00000536563 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
CD4-205ENST00000536563 CNTNAP4Q9C0A0 1308 aa20.06■□□□□ 0.8
CD4-205ENST00000536563 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
CD4-205ENST00000536563 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
CD4-205ENST00000536563 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
CD4-205ENST00000536563 QSER1Q2KHR3 1735 aa20.05■□□□□ 0.8
CD4-205ENST00000536563 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
CD4-205ENST00000536563 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
CD4-205ENST00000536563 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
CD4-205ENST00000536563 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
CD4-205ENST00000536563 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
CD4-205ENST00000536563 ADAMTS8Q9UP79 889 aa20.04■□□□□ 0.8
CD4-205ENST00000536563 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 RPS6KA4O75676 772 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 CRKLP46109 303 aaKnown RBP20.03■□□□□ 0.8
CD4-205ENST00000536563 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
CD4-205ENST00000536563 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 FMNL2Q96PY5 1086 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 ARXQ96QS3 562 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 SGIP1Q9BQI5 828 aa20.03■□□□□ 0.8
CD4-205ENST00000536563 STARD3NLO95772 234 aa20.02■□□□□ 0.8
CD4-205ENST00000536563 ADRA2BP18089 450 aa20.02■□□□□ 0.8
CD4-205ENST00000536563 RIPK4P57078 832 aa20.02■□□□□ 0.8
CD4-205ENST00000536563 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
CD4-205ENST00000536563 AMIGO3Q86WK7 504 aa20.02■□□□□ 0.8
CD4-205ENST00000536563 ZNF496Q96IT1 587 aaPredicted RBP20.02■□□□□ 0.8
CD4-205ENST00000536563 TEX13AQ9BXU3 409 aaPredicted RBP20.02■□□□□ 0.8
CD4-205ENST00000536563 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
CD4-205ENST00000536563 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
CD4-205ENST00000536563 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
CD4-205ENST00000536563 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
CD4-205ENST00000536563 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
CD4-205ENST00000536563 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
CD4-205ENST00000536563 KCPQ6ZWJ8 1503 aa20■□□□□ 0.79
CD4-205ENST00000536563 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
CD4-205ENST00000536563 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
CD4-205ENST00000536563 RFC4P35249 363 aa19.99■□□□□ 0.79
CD4-205ENST00000536563 INTS5Q6P9B9 1019 aaKnown RBP19.99■□□□□ 0.79
CD4-205ENST00000536563 ARHGEF1Q92888 912 aaKnown RBP19.99■□□□□ 0.79
CD4-205ENST00000536563 KCNQ3O43525 872 aa19.98■□□□□ 0.79
CD4-205ENST00000536563 NEUROD2Q15784 382 aa19.98■□□□□ 0.79
CD4-205ENST00000536563 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
CD4-205ENST00000536563 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
CD4-205ENST00000536563 UBR3Q6ZT12 1888 aa19.96■□□□□ 0.79
CD4-205ENST00000536563 FHDC1Q9C0D6 1143 aaPredicted RBP19.96■□□□□ 0.79
CD4-205ENST00000536563 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
CD4-205ENST00000536563 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
CD4-205ENST00000536563 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms