RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
ABCA4-207ENST00000536513 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
ABCA4-207ENST00000536513 PI4KAP1Q8N8J0 262 aa10.23□□□□□ -0.77
ABCA4-207ENST00000536513 ANP32BQ92688 251 aaKnown RBP10.23□□□□□ -0.77
ABCA4-207ENST00000536513 IL1RAPL2Q9NP60 686 aa10.23□□□□□ -0.77
ABCA4-207ENST00000536513 DIP2AQ14689 1571 aa10.23□□□□□ -0.77
ABCA4-207ENST00000536513 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.23□□□□□ -0.77
ABCA4-207ENST00000536513 FLIIQ13045 1269 aa10.22□□□□□ -0.77
ABCA4-207ENST00000536513 API5Q9BZZ5 524 aaKnown RBP10.22□□□□□ -0.77
ABCA4-207ENST00000536513 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
ABCA4-207ENST00000536513 MAP4K4O95819 1239 aaPredicted RBP10.22□□□□□ -0.77
ABCA4-207ENST00000536513 CCDC27Q2M243 656 aa10.22□□□□□ -0.77
ABCA4-207ENST00000536513 C1orf167Q5SNV9 1468 aa10.22□□□□□ -0.77
ABCA4-207ENST00000536513 MAP2P11137 1827 aaKnown RBP10.22□□□□□ -0.77
ABCA4-207ENST00000536513 BECN1Q14457 450 aa10.21□□□□□ -0.77
ABCA4-207ENST00000536513 CWF19L2Q2TBE0 894 aaKnown RBP10.21□□□□□ -0.77
ABCA4-207ENST00000536513 MRPL50Q8N5N7 158 aaKnown RBP10.21□□□□□ -0.77
ABCA4-207ENST00000536513 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
ABCA4-207ENST00000536513 TOM1O60784 492 aa10.21□□□□□ -0.77
ABCA4-207ENST00000536513 ZCRB1Q8TBF4 217 aaKnown RBP10.21□□□□□ -0.77
ABCA4-207ENST00000536513 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
ABCA4-207ENST00000536513 ERBB3P21860 1342 aa10.21□□□□□ -0.78
ABCA4-207ENST00000536513 PROSER3Q2NL68 480 aa10.21□□□□□ -0.78
ABCA4-207ENST00000536513 CHL1O00533 1208 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 IFNL2Q8IZJ0 200 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 NRXN3Q9Y4C0 1643 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 TECPR2O15040 1411 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 RGPD8O14715 1765 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 C16orf71Q8IYS4 520 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 TRMT2AQ8IZ69 625 aaKnown RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 RILPL2Q969X0 211 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 IGSF1Q8N6C5 1336 aa10.2□□□□□ -0.78
ABCA4-207ENST00000536513 RNMTO43148 476 aaKnown RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
ABCA4-207ENST00000536513 INSRP06213 1382 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 PIK3R4Q99570 1358 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 UBTFL1P0CB47 393 aaPredicted RBP10.19□□□□□ -0.78
ABCA4-207ENST00000536513 GPTP24298 496 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 SMIM5Q71RC9 77 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 USP16Q9Y5T5 823 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 MAP3K5Q99683 1374 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 SURF6O75683 361 aaKnown RBP10.19□□□□□ -0.78
ABCA4-207ENST00000536513 AMOTQ4VCS5 1084 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 AKAP4Q5JQC9 854 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 LRRFIP2Q9Y608 721 aaKnown RBP10.19□□□□□ -0.78
ABCA4-207ENST00000536513 AATKQ6ZMQ8 1374 aa10.19□□□□□ -0.78
ABCA4-207ENST00000536513 LRRC7Q96NW7 1537 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 A1BGP04217 495 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 L1TD1Q5T7N2 865 aaKnown RBP10.18□□□□□ -0.78
ABCA4-207ENST00000536513 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 SLIT1O75093 1534 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 EXOC5O00471 708 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 IL2RBP14784 551 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 MAP3K2Q9Y2U5 619 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 DLC1Q96QB1 1528 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 FRAT2O75474 233 aaPredicted RBP10.18□□□□□ -0.78
ABCA4-207ENST00000536513 COPS6Q7L5N1 327 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 MYD88Q99836 296 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
ABCA4-207ENST00000536513 USP19O94966 1318 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 CYP27B1O15528 508 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 FGD1P98174 961 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 CDC42BPGQ6DT37 1551 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 SRGAP3O43295 1099 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 KLHDC4Q8TBB5 520 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 XAGE3Q8WTP9 111 aa10.17□□□□□ -0.78
ABCA4-207ENST00000536513 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
ABCA4-207ENST00000536513 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 RNF123Q5XPI4 1314 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 OTUD7AQ8TE49 926 aaPredicted RBP10.16□□□□□ -0.78
ABCA4-207ENST00000536513 ZNF790Q6PG37 636 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
ABCA4-207ENST00000536513 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
ABCA4-207ENST00000536513 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
ABCA4-207ENST00000536513 NEURL4Q96JN8 1562 aa10.15□□□□□ -0.78
ABCA4-207ENST00000536513 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
ABCA4-207ENST00000536513 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.78
ABCA4-207ENST00000536513 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
ABCA4-207ENST00000536513 MED14O60244 1454 aa10.15□□□□□ -0.78
ABCA4-207ENST00000536513 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.79
ABCA4-207ENST00000536513 ZMYND15Q9H091 742 aa10.15□□□□□ -0.79
ABCA4-207ENST00000536513 IL16Q14005 1332 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 CDK12Q9NYV4 1490 aaPredicted RBP10.14□□□□□ -0.79
ABCA4-207ENST00000536513 SEC24BO95487 1268 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 NBPF7P0C2Y1 421 aaPredicted RBP10.14□□□□□ -0.79
ABCA4-207ENST00000536513 PHKG2P15735 406 aa10.14□□□□□ -0.79
ABCA4-207ENST00000536513 EIF4A1P60842 406 aaKnown RBP10.14□□□□□ -0.79
ABCA4-207ENST00000536513 DDB1Q16531 1140 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms