RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
LMO3-214ENST00000536509 YBX3P16989 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
LMO3-214ENST00000536509 TRIM26Q12899 539 aaPredicted RBP15.37■□□□□ 0.05
LMO3-214ENST00000536509 AMER1Q5JTC6 1135 aaPredicted RBP15.37■□□□□ 0.05
LMO3-214ENST00000536509 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
LMO3-214ENST00000536509 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
LMO3-214ENST00000536509 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
LMO3-214ENST00000536509 SSFA2P28290 1259 aa15.35■□□□□ 0.05
LMO3-214ENST00000536509 PIGBQ92521 554 aa15.35■□□□□ 0.05
LMO3-214ENST00000536509 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
LMO3-214ENST00000536509 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
LMO3-214ENST00000536509 SIK1P57059 783 aa15.33■□□□□ 0.04
LMO3-214ENST00000536509 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
LMO3-214ENST00000536509 IFNL2Q8IZJ0 200 aa15.33■□□□□ 0.04
LMO3-214ENST00000536509 CLSPNQ9HAW4 1339 aa15.33■□□□□ 0.04
LMO3-214ENST00000536509 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
LMO3-214ENST00000536509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.32■□□□□ 0.04
LMO3-214ENST00000536509 EYA1Q99502 592 aa15.32■□□□□ 0.04
LMO3-214ENST00000536509 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
LMO3-214ENST00000536509 PHKG2P15735 406 aa15.3■□□□□ 0.04
LMO3-214ENST00000536509 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
LMO3-214ENST00000536509 PHF14O94880 888 aa15.29■□□□□ 0.04
LMO3-214ENST00000536509 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
LMO3-214ENST00000536509 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
LMO3-214ENST00000536509 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
LMO3-214ENST00000536509 IGSF1Q8N6C5 1336 aa15.28■□□□□ 0.04
LMO3-214ENST00000536509 GPBP1L1Q9HC44 474 aaPredicted RBP15.28■□□□□ 0.04
LMO3-214ENST00000536509 ASAP1Q9ULH1 1129 aa15.28■□□□□ 0.04
LMO3-214ENST00000536509 KIF13BQ9NQT8 1826 aa15.28■□□□□ 0.04
LMO3-214ENST00000536509 ADCY9O60503 1353 aa15.27■□□□□ 0.04
LMO3-214ENST00000536509 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
LMO3-214ENST00000536509 GNPATO15228 680 aa15.27■□□□□ 0.04
LMO3-214ENST00000536509 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
LMO3-214ENST00000536509 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
LMO3-214ENST00000536509 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
LMO3-214ENST00000536509 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
LMO3-214ENST00000536509 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
LMO3-214ENST00000536509 ITPK1Q13572 414 aa15.25■□□□□ 0.03
LMO3-214ENST00000536509 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
LMO3-214ENST00000536509 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
LMO3-214ENST00000536509 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
LMO3-214ENST00000536509 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
LMO3-214ENST00000536509 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
LMO3-214ENST00000536509 KDRP35968 1356 aa15.24■□□□□ 0.03
LMO3-214ENST00000536509 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
LMO3-214ENST00000536509 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
LMO3-214ENST00000536509 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
LMO3-214ENST00000536509 TGFB2P61812 414 aa15.23■□□□□ 0.03
LMO3-214ENST00000536509 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
LMO3-214ENST00000536509 MMP10P09238 476 aa15.22■□□□□ 0.03
LMO3-214ENST00000536509 TNNT2P45379 298 aaPredicted RBP15.22■□□□□ 0.03
LMO3-214ENST00000536509 EIF4G2P78344 907 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMO3-214ENST00000536509 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
LMO3-214ENST00000536509 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
LMO3-214ENST00000536509 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
LMO3-214ENST00000536509 CABP4P57796 275 aa15.2■□□□□ 0.02
LMO3-214ENST00000536509 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
LMO3-214ENST00000536509 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
LMO3-214ENST00000536509 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
LMO3-214ENST00000536509 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
LMO3-214ENST00000536509 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
LMO3-214ENST00000536509 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 HSPA6P17066 643 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 RFC4P35249 363 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
LMO3-214ENST00000536509 PANK3Q9H999 370 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
LMO3-214ENST00000536509 C10orf71Q711Q0 1435 aa15.18■□□□□ 0.02
LMO3-214ENST00000536509 MTHFSP49914 203 aa15.18■□□□□ 0.02
LMO3-214ENST00000536509 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
LMO3-214ENST00000536509 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
LMO3-214ENST00000536509 ARFGEF1Q9Y6D6 1849 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
LMO3-214ENST00000536509 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
LMO3-214ENST00000536509 GYS1P13807 737 aa15.16■□□□□ 0.02
LMO3-214ENST00000536509 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
LMO3-214ENST00000536509 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
LMO3-214ENST00000536509 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
LMO3-214ENST00000536509 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
LMO3-214ENST00000536509 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
LMO3-214ENST00000536509 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
LMO3-214ENST00000536509 KIF3CO14782 793 aa15.13■□□□□ 0.01
LMO3-214ENST00000536509 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
LMO3-214ENST00000536509 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
LMO3-214ENST00000536509 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
LMO3-214ENST00000536509 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
LMO3-214ENST00000536509 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
LMO3-214ENST00000536509 TJP1Q07157 1748 aa15.12■□□□□ 0.01
LMO3-214ENST00000536509 TOMM70O94826 608 aa15.12■□□□□ 0.01
LMO3-214ENST00000536509 FCHSD2O94868 740 aa15.12■□□□□ 0.01
LMO3-214ENST00000536509 DPEP1P16444 411 aa15.12■□□□□ 0.01
LMO3-214ENST00000536509 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
LMO3-214ENST00000536509 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
LMO3-214ENST00000536509 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms