RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 RIMS1Q86UR5 1692 aaKnown RBP8.14□□□□□ -1.11
USP30-208ENST00000536393 LMTK3Q96Q04 1460 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 PTPRUQ92729 1446 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 KDRP35968 1356 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 CHL1O00533 1208 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 DYNC1I1O14576 645 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 HOXB7P09629 217 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 NCLP19338 710 aaKnown RBP8.13□□□□□ -1.11
USP30-208ENST00000536393 LRSAM1Q6UWE0 723 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 TMEM87AQ8NBN3 555 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 TOPAZ1Q8N9V7 1692 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 DLG5Q8TDM6 1919 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 MYO5BQ9ULV0 1848 aa8.13□□□□□ -1.11
USP30-208ENST00000536393 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 RAB11FIP3O75154 756 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 TNNT2P45379 298 aaPredicted RBP8.12□□□□□ -1.11
USP30-208ENST00000536393 HSP90AB4PQ58FF6 505 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 PLCD3Q8N3E9 789 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 GAS2L2Q8NHY3 880 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
USP30-208ENST00000536393 STAP2Q9UGK3 403 aa8.12□□□□□ -1.11
USP30-208ENST00000536393 CAVIN2O95810 425 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 CEP85Q6P2H3 762 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 LMBRD1Q9NUN5 540 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 CABP1Q9NZU7 370 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 CFAP65Q6ZU64 1925 aaKnown RBP8.11□□□□□ -1.11
USP30-208ENST00000536393 RGS12O14924 1447 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 ADGRL3Q9HAR2 1447 aa8.11□□□□□ -1.11
USP30-208ENST00000536393 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 WDR33Q9C0J8 1336 aaKnown RBP8.1□□□□□ -1.11
USP30-208ENST00000536393 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
USP30-208ENST00000536393 SIRT2Q8IXJ6 389 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 CHMP4CQ96CF2 233 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 FBXO3Q9UK99 471 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 NRXN3Q9Y4C0 1643 aa8.1□□□□□ -1.11
USP30-208ENST00000536393 TUBGCP6Q96RT7 1819 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 BRD1O95696 1058 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 GNAI2P04899 355 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 GSPT1P15170 499 aaKnown RBP8.09□□□□□ -1.11
USP30-208ENST00000536393 ZSCAN23Q3MJ62 389 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 USP25Q9UHP3 1055 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 TNNQ9UQP3 1299 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.09□□□□□ -1.11
USP30-208ENST00000536393 OVOS2A0A0G2JMS6 1433 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 ANKARQ7Z5J8 1434 aa8.09□□□□□ -1.11
USP30-208ENST00000536393 SBNO1A3KN83 1393 aa8.09□□□□□ -1.12
USP30-208ENST00000536393 FLT4P35916 1363 aa8.09□□□□□ -1.12
USP30-208ENST00000536393 CCDC30Q5VVM6 783 aa8.08□□□□□ -1.12
USP30-208ENST00000536393 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
USP30-208ENST00000536393 STK31Q9BXU1 1019 aa8.08□□□□□ -1.12
USP30-208ENST00000536393 PANK2Q9BZ23 570 aa8.08□□□□□ -1.12
USP30-208ENST00000536393 MINK1Q8N4C8 1332 aaPredicted RBP8.07□□□□□ -1.12
USP30-208ENST00000536393 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 USP6P35125 1406 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 CRB1P82279 1406 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 GOLGA6L6A8MZA4 724 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 HIP1O00291 1037 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 SDSP20132 328 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP30-208ENST00000536393 PDE1AP54750 535 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 RUFY2Q8WXA3 655 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
USP30-208ENST00000536393 ZSCAN31Q96LW9 406 aaPredicted RBP8.07□□□□□ -1.12
USP30-208ENST00000536393 TM6SF1Q9BZW5 370 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 LRRCC1Q9C099 1032 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 SH2B1Q9NRF2 756 aaPredicted RBP8.07□□□□□ -1.12
USP30-208ENST00000536393 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 PLEKHG1Q9ULL1 1385 aa8.07□□□□□ -1.12
USP30-208ENST00000536393 USP42Q9H9J4 1324 aaKnown RBP8.06□□□□□ -1.12
USP30-208ENST00000536393 FAM193AP78312 1265 aa8.06□□□□□ -1.12
USP30-208ENST00000536393 KIAA2012Q0VF49 1180 aa8.06□□□□□ -1.12
USP30-208ENST00000536393 SASS6Q6UVJ0 657 aa8.06□□□□□ -1.12
USP30-208ENST00000536393 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
USP30-208ENST00000536393 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
USP30-208ENST00000536393 GZF1Q9H116 711 aaPredicted RBP8.06□□□□□ -1.12
USP30-208ENST00000536393 CHD2O14647 1828 aaKnown RBP8.06□□□□□ -1.12
USP30-208ENST00000536393 TTC41PQ6P2S7 1318 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 RAD50Q92878 1312 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 TSPOAP1O95153 1857 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 PDCP20941 246 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 SSFA2P28290 1259 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 SYCP1Q15431 976 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 CCDC183Q5T5S1 534 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 MCTP1Q6DN14 999 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 GAS2L3Q86XJ1 694 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 DCBLD2Q96PD2 775 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 ESYT1Q9BSJ8 1104 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 TSPY26PQ9H489 355 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 DIAPH3Q9NSV4 1193 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 DIP2BQ9P265 1576 aa8.05□□□□□ -1.12
USP30-208ENST00000536393 IGSF1Q8N6C5 1336 aa8.04□□□□□ -1.12
USP30-208ENST00000536393 PHRF1Q9P1Y6 1649 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms