RNA–Protein interactions for RNA: ENST00000535819.1

TM7SF3-205, Transcript of transmembrane 7 superfamily member 3, human

TSL 3

Gene TM7SF3, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM7SF3-205	ENST00000535819	COL23A1	Q86Y22	540 aa	Predicted RBP	32.75	■■■□□ 2.83
TM7SF3-205	ENST00000535819	ARX	Q96QS3	562 aa		32.74	■■■□□ 2.83
TM7SF3-205	ENST00000535819	POLD1	P28340	1107 aa		32.73	■■■□□ 2.83
TM7SF3-205	ENST00000535819	MTHFSD	Q2M296	383 aa	Known RBP	32.73	■■■□□ 2.83
TM7SF3-205	ENST00000535819	NFATC2IP	Q8NCF5	419 aa		32.73	■■■□□ 2.83
TM7SF3-205	ENST00000535819	SCN11A	Q9UI33	1791 aa		32.71	■■■□□ 2.83
TM7SF3-205	ENST00000535819	MSH5	O43196	834 aa		32.71	■■■□□ 2.83
TM7SF3-205	ENST00000535819	LINC00116	Q8NCU8	138 aa		32.71	■■■□□ 2.83
TM7SF3-205	ENST00000535819	ZNF831	Q5JPB2	1677 aa		32.71	■■■□□ 2.83
TM7SF3-205	ENST00000535819	COL24A1	Q17RW2	1714 aa		32.71	■■■□□ 2.83
TM7SF3-205	ENST00000535819	ITPK1	Q13572	414 aa		32.7	■■■□□ 2.83
TM7SF3-205	ENST00000535819	RNMT	O43148	476 aa	Known RBP	32.69	■■■□□ 2.82
TM7SF3-205	ENST00000535819	SSFA2	P28290	1259 aa		32.69	■■■□□ 2.82
TM7SF3-205	ENST00000535819	GAS2L2	Q8NHY3	880 aa		32.69	■■■□□ 2.82
TM7SF3-205	ENST00000535819	DCAF8L1	A6NGE4	600 aa		32.68	■■■□□ 2.82
TM7SF3-205	ENST00000535819	RBM42	Q9BTD8	480 aa	Known RBP	32.68	■■■□□ 2.82
TM7SF3-205	ENST00000535819	SLC52A2	Q9HAB3	445 aa		32.68	■■■□□ 2.82
TM7SF3-205	ENST00000535819	SYT17	Q9BSW7	474 aa		32.67	■■■□□ 2.82
TM7SF3-205	ENST00000535819	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.67	■■■□□ 2.82
TM7SF3-205	ENST00000535819	MAP3K5	Q99683	1374 aa		32.67	■■■□□ 2.82
TM7SF3-205	ENST00000535819	LGR6	Q9HBX8	967 aa		32.66	■■■□□ 2.82
TM7SF3-205	ENST00000535819	SLC4A9	Q96Q91	983 aa		32.65	■■■□□ 2.82
TM7SF3-205	ENST00000535819	MRC1	P22897	1456 aa		32.64	■■■□□ 2.82
TM7SF3-205	ENST00000535819	RC3H1	Q5TC82	1133 aa	Known RBP	32.64	■■■□□ 2.82
TM7SF3-205	ENST00000535819	RSPH6A	Q9H0K4	717 aa		32.64	■■■□□ 2.82
TM7SF3-205	ENST00000535819	UBR3	Q6ZT12	1888 aa		32.63	■■■□□ 2.81
TM7SF3-205	ENST00000535819	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.63	■■■□□ 2.81
TM7SF3-205	ENST00000535819	ADAMTS7	Q9UKP4	1686 aa		32.62	■■■□□ 2.81
TM7SF3-205	ENST00000535819	GNAT3	A8MTJ3	354 aa		32.61	■■■□□ 2.81
TM7SF3-205	ENST00000535819	GNPAT	O15228	680 aa		32.61	■■■□□ 2.81
TM7SF3-205	ENST00000535819	FCHSD2	O94868	740 aa		32.61	■■■□□ 2.81
TM7SF3-205	ENST00000535819	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.61	■■■□□ 2.81
TM7SF3-205	ENST00000535819	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
TM7SF3-205	ENST00000535819	CNTNAP4	Q9C0A0	1308 aa		32.6	■■■□□ 2.81
TM7SF3-205	ENST00000535819	PTCD1	O75127	700 aa	Known RBP	32.6	■■■□□ 2.81
TM7SF3-205	ENST00000535819	PRKAR2B	P31323	418 aa		32.6	■■■□□ 2.81
TM7SF3-205	ENST00000535819	ZEB1	P37275	1124 aa	Predicted RBP	32.6	■■■□□ 2.81
TM7SF3-205	ENST00000535819	PHF14	O94880	888 aa		32.59	■■■□□ 2.81
TM7SF3-205	ENST00000535819	RALBP1	Q15311	655 aa		32.58	■■■□□ 2.81
TM7SF3-205	ENST00000535819	AMIGO3	Q86WK7	504 aa		32.58	■■■□□ 2.81
TM7SF3-205	ENST00000535819	RTCB	Q9Y3I0	505 aa	Known RBP	32.58	■■■□□ 2.81
TM7SF3-205	ENST00000535819	ADRA2B	P18089	450 aa		32.56	■■■□□ 2.8
TM7SF3-205	ENST00000535819	DDX10	Q13206	875 aa	Known RBP	32.56	■■■□□ 2.8
TM7SF3-205	ENST00000535819	COL5A3	P25940	1745 aa	Predicted RBP	32.55	■■■□□ 2.8
TM7SF3-205	ENST00000535819	PHACTR3	Q96KR7	559 aa		32.55	■■■□□ 2.8
TM7SF3-205	ENST00000535819	VIRMA	Q69YN4	1812 aa	Known RBP	32.55	■■■□□ 2.8
TM7SF3-205	ENST00000535819	TRAPPC3L	Q5T215	181 aa		32.54	■■■□□ 2.8
TM7SF3-205	ENST00000535819	MSL1	Q68DK7	614 aa		32.54	■■■□□ 2.8
TM7SF3-205	ENST00000535819	CIC	Q96RK0	1608 aa	Predicted RBP	32.54	■■■□□ 2.8
TM7SF3-205	ENST00000535819	RPS6KA4	O75676	772 aa		32.53	■■■□□ 2.8
TM7SF3-205	ENST00000535819	TEF	Q10587	303 aa		32.52	■■■□□ 2.8
TM7SF3-205	ENST00000535819	IL17RE	Q8NFR9	667 aa		32.52	■■■□□ 2.8
TM7SF3-205	ENST00000535819	SMIM5	Q71RC9	77 aa		32.5	■■■□□ 2.79
TM7SF3-205	ENST00000535819	VSIG10	Q8N0Z9	540 aa		32.5	■■■□□ 2.79
TM7SF3-205	ENST00000535819	SLC39A6	Q13433	755 aa		32.49	■■■□□ 2.79
TM7SF3-205	ENST00000535819	CEMIP	Q8WUJ3	1361 aa		32.48	■■■□□ 2.79
TM7SF3-205	ENST00000535819	CRKL	P46109	303 aa	Known RBP	32.48	■■■□□ 2.79
TM7SF3-205	ENST00000535819	KLHL34	Q8N239	644 aa		32.48	■■■□□ 2.79
TM7SF3-205	ENST00000535819	NEFM	P07197	916 aa		32.47	■■■□□ 2.79
TM7SF3-205	ENST00000535819	TTC5	Q8N0Z6	440 aa		32.47	■■■□□ 2.79
TM7SF3-205	ENST00000535819	ARHGEF1	Q92888	912 aa	Known RBP	32.46	■■■□□ 2.79
TM7SF3-205	ENST00000535819	PNN	Q9H307	717 aa	Known RBP	32.46	■■■□□ 2.79
TM7SF3-205	ENST00000535819	KCP	Q6ZWJ8	1503 aa		32.46	■■■□□ 2.79
TM7SF3-205	ENST00000535819	TJP1	Q07157	1748 aa		32.46	■■■□□ 2.79
TM7SF3-205	ENST00000535819	HTATSF1	O43719	755 aa	Known RBP	32.45	■■■□□ 2.79
TM7SF3-205	ENST00000535819	RTF1	Q92541	710 aa	Known RBP	32.45	■■■□□ 2.79
TM7SF3-205	ENST00000535819	RFC4	P35249	363 aa		32.44	■■■□□ 2.78
TM7SF3-205	ENST00000535819	DNAJC10	Q8IXB1	793 aa		32.44	■■■□□ 2.78
TM7SF3-205	ENST00000535819	NLGN1	Q8N2Q7	840 aa		32.44	■■■□□ 2.78
TM7SF3-205	ENST00000535819	CD2AP	Q9Y5K6	639 aa		32.44	■■■□□ 2.78
TM7SF3-205	ENST00000535819	MYH14	Q7Z406	1995 aa	Known RBP	32.44	■■■□□ 2.78
TM7SF3-205	ENST00000535819	ZNF790	Q6PG37	636 aa		32.42	■■■□□ 2.78
TM7SF3-205	ENST00000535819	CYP19A1	P11511	503 aa	Predicted RBP	32.41	■■■□□ 2.78
TM7SF3-205	ENST00000535819	INTS5	Q6P9B9	1019 aa	Known RBP	32.41	■■■□□ 2.78
TM7SF3-205	ENST00000535819	UBR2	Q8IWV8	1755 aa		32.4	■■■□□ 2.78
TM7SF3-205	ENST00000535819	CCDC87	Q9NVE4	849 aa		32.4	■■■□□ 2.78
TM7SF3-205	ENST00000535819	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.4	■■■□□ 2.78
TM7SF3-205	ENST00000535819	SIPA1L3	O60292	1781 aa	Predicted RBP	32.4	■■■□□ 2.78
TM7SF3-205	ENST00000535819	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.39	■■■□□ 2.78
TM7SF3-205	ENST00000535819	BTBD11	A6QL63	1104 aa		32.37	■■■□□ 2.77
TM7SF3-205	ENST00000535819	NLGN2	Q8NFZ4	835 aa		32.37	■■■□□ 2.77
TM7SF3-205	ENST00000535819	PLEKHF1	Q96S99	279 aa		32.37	■■■□□ 2.77
TM7SF3-205	ENST00000535819	STARD3NL	O95772	234 aa		32.36	■■■□□ 2.77
TM7SF3-205	ENST00000535819	GYS1	P13807	737 aa		32.36	■■■□□ 2.77
TM7SF3-205	ENST00000535819	HEG1	Q9ULI3	1381 aa		32.35	■■■□□ 2.77
TM7SF3-205	ENST00000535819	ZNF496	Q96IT1	587 aa	Predicted RBP	32.35	■■■□□ 2.77
TM7SF3-205	ENST00000535819	FMNL2	Q96PY5	1086 aa		32.35	■■■□□ 2.77
TM7SF3-205	ENST00000535819	MMP10	P09238	476 aa		32.34	■■■□□ 2.77
TM7SF3-205	ENST00000535819	GPR162	Q16538	588 aa		32.34	■■■□□ 2.77
TM7SF3-205	ENST00000535819	SOS1	Q07889	1333 aa	Predicted RBP	32.33	■■■□□ 2.77
TM7SF3-205	ENST00000535819	MCM10	Q7L590	875 aa		32.33	■■■□□ 2.77
TM7SF3-205	ENST00000535819	USP42	Q9H9J4	1324 aa	Known RBP	32.32	■■■□□ 2.76
TM7SF3-205	ENST00000535819	YY1	P25490	414 aa		32.32	■■■□□ 2.76
TM7SF3-205	ENST00000535819	C4A	P0C0L4	1744 aa		32.31	■■■□□ 2.76
TM7SF3-205	ENST00000535819	MAPK8IP3	Q9UPT6	1336 aa		32.3	■■■□□ 2.76
TM7SF3-205	ENST00000535819	NFE2L2	Q16236	605 aa		32.29	■■■□□ 2.76
TM7SF3-205	ENST00000535819	ZBTB1	Q9Y2K1	713 aa		32.29	■■■□□ 2.76
TM7SF3-205	ENST00000535819	ZPR1	O75312	459 aa		32.28	■■■□□ 2.76
TM7SF3-205	ENST00000535819	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.28	■■■□□ 2.76
TM7SF3-205	ENST00000535819	UTRN	P46939	3433 aa		32.27	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms