RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 STARD3NLO95772 234 aa11.12□□□□□ -0.63
TNC-210ENST00000535648 ARHGAP29Q52LW3 1261 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 DAPK1P53355 1430 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 CETN2P41208 172 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
TNC-210ENST00000535648 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 IDH1O75874 414 aaKnown RBP11.1□□□□□ -0.63
TNC-210ENST00000535648 USP5P45974 858 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
TNC-210ENST00000535648 CCDC91Q7Z6B0 441 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 TSG101Q99816 390 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 RRS1Q15050 365 aaKnown RBP11.1□□□□□ -0.63
TNC-210ENST00000535648 MCM3P25205 808 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 SPA17Q15506 151 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
TNC-210ENST00000535648 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 ARAP1Q96P48 1450 aa11.1□□□□□ -0.63
TNC-210ENST00000535648 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 CCDC141Q6ZP82 1450 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 GLRX3O76003 335 aaKnown RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 SSR1P43307 286 aaKnown RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 SLC26A8Q96RN1 970 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 FKBP15Q5T1M5 1219 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 ANKLE2Q86XL3 938 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 CASQ1P31415 396 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 SYNJ1O43426 1573 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 ANO10Q9NW15 660 aa11.09□□□□□ -0.63
TNC-210ENST00000535648 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
TNC-210ENST00000535648 EPRSP07814 1512 aaKnown RBP11.08□□□□□ -0.63
TNC-210ENST00000535648 CAVIN4Q5BKX8 364 aa11.08□□□□□ -0.63
TNC-210ENST00000535648 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.63
TNC-210ENST00000535648 UBXN4Q92575 508 aa11.08□□□□□ -0.63
TNC-210ENST00000535648 CALCOCO1Q9P1Z2 691 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 MPNDQ8N594 471 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 PIBF1Q8WXW3 757 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 NUTM1Q86Y26 1132 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 SYCE3A1L190 88 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 MX1P20591 662 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 SH2B1Q9NRF2 756 aaPredicted RBP11.08□□□□□ -0.64
TNC-210ENST00000535648 MAP3K1Q13233 1512 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
TNC-210ENST00000535648 KIF5CO60282 957 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 SLFN5Q08AF3 891 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 VPS36Q86VN1 386 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 NKTRP30414 1462 aaKnown RBP11.07□□□□□ -0.64
TNC-210ENST00000535648 PPM1FP49593 454 aaPredicted RBP11.07□□□□□ -0.64
TNC-210ENST00000535648 ALDH1L2Q3SY69 923 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
TNC-210ENST00000535648 SFPQP23246 707 aaKnown RBP eCLIP11.07□□□□□ -0.64
TNC-210ENST00000535648 LARP1Q6PKG0 1096 aaKnown RBP11.07□□□□□ -0.64
TNC-210ENST00000535648 CAMK4Q16566 473 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 RAB34Q9BZG1 259 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
TNC-210ENST00000535648 ABCF2Q9UG63 623 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
TNC-210ENST00000535648 CTAGE5O15320 804 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
TNC-210ENST00000535648 CCDC83Q8IWF9 413 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 ABCC11Q96J66 1382 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 MAP2K1Q02750 393 aaPredicted RBP11.06□□□□□ -0.64
TNC-210ENST00000535648 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 NAPBQ9H115 298 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
TNC-210ENST00000535648 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 PRIMPOLQ96LW4 560 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 KIF14Q15058 1648 aa11.06□□□□□ -0.64
TNC-210ENST00000535648 SHTN1A0MZ66 631 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 HS1BP3Q53T59 392 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 CCDC150Q8NCX0 1101 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 ANAPC15P60006 121 aa11.05□□□□□ -0.64
TNC-210ENST00000535648 C8orf76Q96K31 380 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms