RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-214ENST00000535222 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
CPSF7-214ENST00000535222 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
CPSF7-214ENST00000535222 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
CPSF7-214ENST00000535222 TMF1P82094 1093 aa11.09□□□□□ -0.63
CPSF7-214ENST00000535222 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
CPSF7-214ENST00000535222 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
CPSF7-214ENST00000535222 DPY19L2Q6NUT2 758 aa11.08□□□□□ -0.64
CPSF7-214ENST00000535222 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
CPSF7-214ENST00000535222 RASSF7Q02833 373 aa11.07□□□□□ -0.64
CPSF7-214ENST00000535222 MAP2P11137 1827 aaKnown RBP11.07□□□□□ -0.64
CPSF7-214ENST00000535222 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
CPSF7-214ENST00000535222 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 GYS1P13807 737 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 IP6K1Q92551 441 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CPSF7-214ENST00000535222 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
CPSF7-214ENST00000535222 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
CPSF7-214ENST00000535222 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 GNPATO15228 680 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 SIK1P57059 783 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 HABP4Q5JVS0 413 aaKnown RBP11.04□□□□□ -0.64
CPSF7-214ENST00000535222 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 DCAF11Q8TEB1 546 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 MEGF6O75095 1541 aa11.04□□□□□ -0.64
CPSF7-214ENST00000535222 CA12O43570 354 aa11.03□□□□□ -0.64
CPSF7-214ENST00000535222 ITPK1Q13572 414 aa11.03□□□□□ -0.64
CPSF7-214ENST00000535222 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
CPSF7-214ENST00000535222 FAM208AQ9UK61 1670 aaKnown RBP11.03□□□□□ -0.64
CPSF7-214ENST00000535222 NFKBIEO00221 500 aa11.02□□□□□ -0.65
CPSF7-214ENST00000535222 CHRNA5P30532 468 aa11.02□□□□□ -0.65
CPSF7-214ENST00000535222 PIGBQ92521 554 aa11.02□□□□□ -0.65
CPSF7-214ENST00000535222 ARHGEF1Q92888 912 aaKnown RBP11.02□□□□□ -0.65
CPSF7-214ENST00000535222 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.65
CPSF7-214ENST00000535222 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.65
CPSF7-214ENST00000535222 LTN1O94822 1766 aa11.01□□□□□ -0.65
CPSF7-214ENST00000535222 MAP2K2P36507 400 aa11.01□□□□□ -0.65
CPSF7-214ENST00000535222 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-214ENST00000535222 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
CPSF7-214ENST00000535222 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
CPSF7-214ENST00000535222 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
CPSF7-214ENST00000535222 DGKZQ13574 1117 aa11□□□□□ -0.65
CPSF7-214ENST00000535222 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
CPSF7-214ENST00000535222 GPR101Q96P66 508 aaPredicted RBP11□□□□□ -0.65
CPSF7-214ENST00000535222 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
CPSF7-214ENST00000535222 RTCBQ9Y3I0 505 aaKnown RBP11□□□□□ -0.65
CPSF7-214ENST00000535222 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
CPSF7-214ENST00000535222 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
CPSF7-214ENST00000535222 LTBP1Q14766 1721 aa11□□□□□ -0.65
CPSF7-214ENST00000535222 IQCA1LA6NCM1 817 aa10.99□□□□□ -0.65
CPSF7-214ENST00000535222 DLL1O00548 723 aa10.99□□□□□ -0.65
CPSF7-214ENST00000535222 ECE1P42892 770 aa10.99□□□□□ -0.65
CPSF7-214ENST00000535222 CCDC88AQ3V6T2 1871 aa10.99□□□□□ -0.65
CPSF7-214ENST00000535222 FXR1P51114 621 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF7-214ENST00000535222 SOX10P56693 466 aa10.98□□□□□ -0.65
CPSF7-214ENST00000535222 DDR1Q08345 913 aa10.98□□□□□ -0.65
CPSF7-214ENST00000535222 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-214ENST00000535222 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-214ENST00000535222 CAPNS2Q96L46 248 aa10.98□□□□□ -0.65
CPSF7-214ENST00000535222 COL6A3P12111 3177 aa10.98□□□□□ -0.65
CPSF7-214ENST00000535222 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
CPSF7-214ENST00000535222 CYP27B1O15528 508 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-214ENST00000535222 ATP6V1AP38606 617 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 PCDH11XQ9BZA7 1347 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 PCDH11YQ9BZA8 1340 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 KTN1Q86UP2 1357 aaKnown RBP10.97□□□□□ -0.65
CPSF7-214ENST00000535222 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
CPSF7-214ENST00000535222 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 ITGB4P16144 1822 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 SCN4AP35499 1836 aa10.97□□□□□ -0.65
CPSF7-214ENST00000535222 LTBP3Q9NS15 1303 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 RPS6KA4O75676 772 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 TM4SF1P30408 202 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
CPSF7-214ENST00000535222 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
CPSF7-214ENST00000535222 RFC4P35249 363 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 NME9Q86XW9 330 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 TTLL6Q8N841 843 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
CPSF7-214ENST00000535222 CNTNAP4Q9C0A0 1308 aa10.94□□□□□ -0.66
CPSF7-214ENST00000535222 LTV1Q96GA3 475 aaPredicted RBP10.94□□□□□ -0.66
CPSF7-214ENST00000535222 DDX21Q9NR30 783 aaKnown RBP eCLIP10.94□□□□□ -0.66
CPSF7-214ENST00000535222 ASAP1Q9ULH1 1129 aa10.94□□□□□ -0.66
CPSF7-214ENST00000535222 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
CPSF7-214ENST00000535222 INSRP06213 1382 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 KDRP35968 1356 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 ZNF831Q5JPB2 1677 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 HOXC9P31274 260 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 BRPF1P55201 1214 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-214ENST00000535222 FKBP8Q14318 412 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms