RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 ATP6V1AP38606 617 aa21.22■□□□□ 0.99
PAX6-230ENST00000534390 GAS2L2Q8NHY3 880 aa21.22■□□□□ 0.99
PAX6-230ENST00000534390 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
PAX6-230ENST00000534390 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
PAX6-230ENST00000534390 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
PAX6-230ENST00000534390 AK7Q96M32 723 aa21.21■□□□□ 0.99
PAX6-230ENST00000534390 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
PAX6-230ENST00000534390 C4BP0C0L5 1744 aa21.21■□□□□ 0.99
PAX6-230ENST00000534390 RNMTO43148 476 aaKnown RBP21.2■□□□□ 0.98
PAX6-230ENST00000534390 HMGB2P26583 209 aaKnown RBP21.2■□□□□ 0.98
PAX6-230ENST00000534390 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
PAX6-230ENST00000534390 QSER1Q2KHR3 1735 aa21.2■□□□□ 0.98
PAX6-230ENST00000534390 MAP3K5Q99683 1374 aa21.2■□□□□ 0.98
PAX6-230ENST00000534390 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
PAX6-230ENST00000534390 PHACTR3Q96KR7 559 aa21.19■□□□□ 0.98
PAX6-230ENST00000534390 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
PAX6-230ENST00000534390 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
PAX6-230ENST00000534390 SLC52A2Q9HAB3 445 aa21.18■□□□□ 0.98
PAX6-230ENST00000534390 FCHSD2O94868 740 aa21.17■□□□□ 0.98
PAX6-230ENST00000534390 PHF14O94880 888 aa21.17■□□□□ 0.98
PAX6-230ENST00000534390 NEFMP07197 916 aa21.17■□□□□ 0.98
PAX6-230ENST00000534390 ITPK1Q13572 414 aa21.17■□□□□ 0.98
PAX6-230ENST00000534390 MYBBP1AQ9BQG0 1328 aaKnown RBP21.17■□□□□ 0.98
PAX6-230ENST00000534390 MRC1P22897 1456 aa21.14■□□□□ 0.98
PAX6-230ENST00000534390 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
PAX6-230ENST00000534390 GNPATO15228 680 aa21.14■□□□□ 0.97
PAX6-230ENST00000534390 TEFQ10587 303 aa21.14■□□□□ 0.97
PAX6-230ENST00000534390 COL23A1Q86Y22 540 aaPredicted RBP21.14■□□□□ 0.97
PAX6-230ENST00000534390 SLC39A6Q13433 755 aa21.13■□□□□ 0.97
PAX6-230ENST00000534390 SMIM5Q71RC9 77 aa21.13■□□□□ 0.97
PAX6-230ENST00000534390 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
PAX6-230ENST00000534390 PTGER2P43116 358 aa21.12■□□□□ 0.97
PAX6-230ENST00000534390 MSL1Q68DK7 614 aa21.12■□□□□ 0.97
PAX6-230ENST00000534390 SLC16A10Q8TF71 515 aa21.12■□□□□ 0.97
PAX6-230ENST00000534390 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
PAX6-230ENST00000534390 SLC4A9Q96Q91 983 aa21.12■□□□□ 0.97
PAX6-230ENST00000534390 POLD1P28340 1107 aa21.11■□□□□ 0.97
PAX6-230ENST00000534390 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
PAX6-230ENST00000534390 UBR3Q6ZT12 1888 aa21.11■□□□□ 0.97
PAX6-230ENST00000534390 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
PAX6-230ENST00000534390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.1■□□□□ 0.97
PAX6-230ENST00000534390 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
PAX6-230ENST00000534390 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
PAX6-230ENST00000534390 IL17REQ8NFR9 667 aa21.1■□□□□ 0.97
PAX6-230ENST00000534390 AMIGO3Q86WK7 504 aa21.09■□□□□ 0.97
PAX6-230ENST00000534390 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
PAX6-230ENST00000534390 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
PAX6-230ENST00000534390 ZNF831Q5JPB2 1677 aa21.09■□□□□ 0.97
PAX6-230ENST00000534390 MCM10Q7L590 875 aa21.08■□□□□ 0.97
PAX6-230ENST00000534390 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
PAX6-230ENST00000534390 TJP1Q07157 1748 aa21.07■□□□□ 0.96
PAX6-230ENST00000534390 SSFA2P28290 1259 aa21.07■□□□□ 0.96
PAX6-230ENST00000534390 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
PAX6-230ENST00000534390 ARXQ96QS3 562 aa21.07■□□□□ 0.96
PAX6-230ENST00000534390 RTCBQ9Y3I0 505 aaKnown RBP21.07■□□□□ 0.96
PAX6-230ENST00000534390 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
PAX6-230ENST00000534390 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
PAX6-230ENST00000534390 KCPQ6ZWJ8 1503 aa21.05■□□□□ 0.96
PAX6-230ENST00000534390 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
PAX6-230ENST00000534390 DNAJC10Q8IXB1 793 aa21.05■□□□□ 0.96
PAX6-230ENST00000534390 SGIP1Q9BQI5 828 aa21.05■□□□□ 0.96
PAX6-230ENST00000534390 CNTNAP4Q9C0A0 1308 aa21.04■□□□□ 0.96
PAX6-230ENST00000534390 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
PAX6-230ENST00000534390 FHDC1Q9C0D6 1143 aaPredicted RBP21.04■□□□□ 0.96
PAX6-230ENST00000534390 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
PAX6-230ENST00000534390 TRAPPC3LQ5T215 181 aa21.03■□□□□ 0.96
PAX6-230ENST00000534390 PLEKHF1Q96S99 279 aa21.03■□□□□ 0.96
PAX6-230ENST00000534390 DLG5Q8TDM6 1919 aa21.03■□□□□ 0.96
PAX6-230ENST00000534390 NFE2L2Q16236 605 aa21.02■□□□□ 0.96
PAX6-230ENST00000534390 RC3H1Q5TC82 1133 aaKnown RBP21.02■□□□□ 0.96
PAX6-230ENST00000534390 ZNF790Q6PG37 636 aa21.02■□□□□ 0.96
PAX6-230ENST00000534390 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.96
PAX6-230ENST00000534390 UBR2Q8IWV8 1755 aa21.02■□□□□ 0.96
PAX6-230ENST00000534390 MYH14Q7Z406 1995 aaKnown RBP21.01■□□□□ 0.95
PAX6-230ENST00000534390 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
PAX6-230ENST00000534390 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
PAX6-230ENST00000534390 RPS6KA4O75676 772 aa21■□□□□ 0.95
PAX6-230ENST00000534390 RFC4P35249 363 aa21■□□□□ 0.95
PAX6-230ENST00000534390 ZNF496Q96IT1 587 aaPredicted RBP21■□□□□ 0.95
PAX6-230ENST00000534390 CCDC87Q9NVE4 849 aa21■□□□□ 0.95
PAX6-230ENST00000534390 COL24A1Q17RW2 1714 aa20.99■□□□□ 0.95
PAX6-230ENST00000534390 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
PAX6-230ENST00000534390 KCNQ3O43525 872 aa20.98■□□□□ 0.95
PAX6-230ENST00000534390 ADRA2BP18089 450 aa20.98■□□□□ 0.95
PAX6-230ENST00000534390 ARHGEF1Q92888 912 aaKnown RBP20.98■□□□□ 0.95
PAX6-230ENST00000534390 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
PAX6-230ENST00000534390 SYT17Q9BSW7 474 aa20.98■□□□□ 0.95
PAX6-230ENST00000534390 CYP19A1P11511 503 aaPredicted RBP20.97■□□□□ 0.95
PAX6-230ENST00000534390 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
PAX6-230ENST00000534390 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
PAX6-230ENST00000534390 C4AP0C0L4 1744 aa20.97■□□□□ 0.95
PAX6-230ENST00000534390 HEG1Q9ULI3 1381 aa20.97■□□□□ 0.95
PAX6-230ENST00000534390 ANP32CO43423 234 aa20.96■□□□□ 0.95
PAX6-230ENST00000534390 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
PAX6-230ENST00000534390 INTS5Q6P9B9 1019 aaKnown RBP20.96■□□□□ 0.95
PAX6-230ENST00000534390 RRP7AQ9Y3A4 280 aaKnown RBP20.96■□□□□ 0.95
PAX6-230ENST00000534390 STARD3NLO95772 234 aa20.95■□□□□ 0.94
PAX6-230ENST00000534390 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
PAX6-230ENST00000534390 RIPK4P57078 832 aa20.95■□□□□ 0.94
PAX6-230ENST00000534390 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms