RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
LDLRAD3-206ENST00000534091 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 ITGB4P16144 1822 aa13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
LDLRAD3-206ENST00000534091 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 PHKG2P15735 406 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
LDLRAD3-206ENST00000534091 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
LDLRAD3-206ENST00000534091 RIPK4P57078 832 aa13.11□□□□□ -0.31
LDLRAD3-206ENST00000534091 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
LDLRAD3-206ENST00000534091 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
LDLRAD3-206ENST00000534091 NEFLP07196 543 aa13.1□□□□□ -0.31
LDLRAD3-206ENST00000534091 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
LDLRAD3-206ENST00000534091 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
LDLRAD3-206ENST00000534091 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
LDLRAD3-206ENST00000534091 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 RCAN3Q9UKA8 241 aa13.09□□□□□ -0.31
LDLRAD3-206ENST00000534091 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
LDLRAD3-206ENST00000534091 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
LDLRAD3-206ENST00000534091 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD3-206ENST00000534091 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
LDLRAD3-206ENST00000534091 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
LDLRAD3-206ENST00000534091 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
LDLRAD3-206ENST00000534091 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
LDLRAD3-206ENST00000534091 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
LDLRAD3-206ENST00000534091 PIGBQ92521 554 aa13.06□□□□□ -0.32
LDLRAD3-206ENST00000534091 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
LDLRAD3-206ENST00000534091 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 C5P01031 1676 aa13.05□□□□□ -0.32
LDLRAD3-206ENST00000534091 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
LDLRAD3-206ENST00000534091 MTHFSDQ2M296 383 aaKnown RBP13.04□□□□□ -0.32
LDLRAD3-206ENST00000534091 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
LDLRAD3-206ENST00000534091 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
LDLRAD3-206ENST00000534091 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
LDLRAD3-206ENST00000534091 GNAI1P63096 354 aa13.03□□□□□ -0.32
LDLRAD3-206ENST00000534091 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
LDLRAD3-206ENST00000534091 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
LDLRAD3-206ENST00000534091 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 SIK1P57059 783 aa13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 CABP4P57796 275 aa13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD3-206ENST00000534091 FKBP8Q14318 412 aa13.01□□□□□ -0.33
LDLRAD3-206ENST00000534091 ZNF827Q17R98 1081 aa13.01□□□□□ -0.33
LDLRAD3-206ENST00000534091 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
LDLRAD3-206ENST00000534091 MRC1P22897 1456 aa13.01□□□□□ -0.33
LDLRAD3-206ENST00000534091 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD3-206ENST00000534091 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
LDLRAD3-206ENST00000534091 KDM3BQ7LBC6 1761 aa13□□□□□ -0.33
LDLRAD3-206ENST00000534091 ATG3Q9NT62 314 aa13□□□□□ -0.33
LDLRAD3-206ENST00000534091 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
LDLRAD3-206ENST00000534091 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 SSFA2P28290 1259 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 PTGER2P43116 358 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 AK7Q96M32 723 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 BABAM1Q9NWV8 329 aa12.98□□□□□ -0.33
LDLRAD3-206ENST00000534091 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
LDLRAD3-206ENST00000534091 CHL1O00533 1208 aa12.97□□□□□ -0.33
LDLRAD3-206ENST00000534091 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
LDLRAD3-206ENST00000534091 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
LDLRAD3-206ENST00000534091 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
LDLRAD3-206ENST00000534091 CNTNAP4Q9C0A0 1308 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
LDLRAD3-206ENST00000534091 ADRA2BP18089 450 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms