RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 H7C1W4 665 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
ATM-223ENST00000533979 F11P03951 625 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 DBN1Q16643 649 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 GNASQ5JWF2 1037 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
ATM-223ENST00000533979 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 BACH1O14867 736 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 ZBTB7BO15156 539 aaPredicted RBP9.09□□□□□ -0.95
ATM-223ENST00000533979 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 GLMNQ92990 594 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 GAS2L1Q99501 681 aaPredicted RBP9.09□□□□□ -0.95
ATM-223ENST00000533979 CUEDC1Q9NWM3 386 aaPredicted RBP9.09□□□□□ -0.95
ATM-223ENST00000533979 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
ATM-223ENST00000533979 CDC14CA4D256 554 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
ATM-223ENST00000533979 GTF2IP78347 998 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 TLR1Q15399 786 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 DEPDC4Q8N2C3 294 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
ATM-223ENST00000533979 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
ATM-223ENST00000533979 COL25A1Q9BXS0 654 aaPredicted RBP9.08□□□□□ -0.96
ATM-223ENST00000533979 TFIP11Q9UBB9 837 aaKnown RBP9.08□□□□□ -0.96
ATM-223ENST00000533979 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
ATM-223ENST00000533979 MTFR1Q15390 333 aa9.07□□□□□ -0.96
ATM-223ENST00000533979 C4orf17Q53FE4 359 aa9.07□□□□□ -0.96
ATM-223ENST00000533979 FOXR1Q6PIV2 292 aa9.07□□□□□ -0.96
ATM-223ENST00000533979 A0A1B0GTH6 734 aa9.06□□□□□ -0.96
ATM-223ENST00000533979 A6NJY4 79 aa9.06□□□□□ -0.96
ATM-223ENST00000533979 PHKA2P46019 1235 aa9.06□□□□□ -0.96
ATM-223ENST00000533979 NIFKQ9BYG3 293 aaKnown RBP9.06□□□□□ -0.96
ATM-223ENST00000533979 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
ATM-223ENST00000533979 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
ATM-223ENST00000533979 USP17L3A6NCW0 530 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 USP17L4A6NCW7 530 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 FAM181BA6NEQ2 426 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 KRT76Q01546 638 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 USP17L1Q7RTZ2 530 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 LARGE2Q8N3Y3 721 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
ATM-223ENST00000533979 ZNF837Q96EG3 531 aaPredicted RBP9.04□□□□□ -0.96
ATM-223ENST00000533979 PPP1R12CQ9BZL4 782 aa9.04□□□□□ -0.96
ATM-223ENST00000533979 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
ATM-223ENST00000533979 GTF3C3Q9Y5Q9 886 aa9.04□□□□□ -0.96
ATM-223ENST00000533979 PALM3A6NDB9 673 aaPredicted RBP9.03□□□□□ -0.96
ATM-223ENST00000533979 PSME1Q06323 249 aa9.03□□□□□ -0.96
ATM-223ENST00000533979 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
ATM-223ENST00000533979 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
ATM-223ENST00000533979 ZMYND15Q9H091 742 aa9.03□□□□□ -0.96
ATM-223ENST00000533979 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
ATM-223ENST00000533979 IQSEC3Q9UPP2 1182 aaPredicted RBP9.03□□□□□ -0.96
ATM-223ENST00000533979 MSX1P28360 303 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 CLDN10P78369 228 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 LBRQ14739 615 aaKnown RBP9.02□□□□□ -0.97
ATM-223ENST00000533979 CCDC102BQ68D86 513 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 OGFOD1Q8N543 542 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 CFHR5Q9BXR6 569 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 NUCKS1Q9H1E3 243 aaKnown RBP9.02□□□□□ -0.97
ATM-223ENST00000533979 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
ATM-223ENST00000533979 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
ATM-223ENST00000533979 SLURP2P0DP57 97 aa9.01□□□□□ -0.97
ATM-223ENST00000533979 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
ATM-223ENST00000533979 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
ATM-223ENST00000533979 MAFBQ9Y5Q3 323 aaPredicted RBP9.01□□□□□ -0.97
ATM-223ENST00000533979 M0R2N6 131 aa9□□□□□ -0.97
ATM-223ENST00000533979 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
ATM-223ENST00000533979 PGBD3Q8N328 593 aa9□□□□□ -0.97
ATM-223ENST00000533979 GTPBP3Q969Y2 492 aaKnown RBP9□□□□□ -0.97
ATM-223ENST00000533979 AIDAQ96BJ3 306 aa9□□□□□ -0.97
ATM-223ENST00000533979 TRERF1Q96PN7 1200 aa9□□□□□ -0.97
ATM-223ENST00000533979 SRSF11Q05519 484 aaKnown RBP8.99□□□□□ -0.97
ATM-223ENST00000533979 CRISPLD1Q9H336 500 aa8.99□□□□□ -0.97
ATM-223ENST00000533979 DKK1O94907 266 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 RASA1P20936 1047 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 EPHA4P54764 986 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 FOXK2Q01167 660 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 GAS6Q14393 721 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 KANK4Q5T7N3 995 aaPredicted RBP8.98□□□□□ -0.97
ATM-223ENST00000533979 SIX5Q8N196 739 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 TPCN2Q8NHX9 752 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 GPAMQ9HCL2 828 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 CABP1Q9NZU7 370 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
ATM-223ENST00000533979 RBM19Q9Y4C8 960 aaKnown RBP8.98□□□□□ -0.97
ATM-223ENST00000533979 LMOD1P29536 600 aaPredicted RBP8.97□□□□□ -0.97
ATM-223ENST00000533979 TEAD4Q15561 434 aa8.97□□□□□ -0.97
ATM-223ENST00000533979 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
ATM-223ENST00000533979 LARP1Q6PKG0 1096 aaKnown RBP8.97□□□□□ -0.97
ATM-223ENST00000533979 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
ATM-223ENST00000533979 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
ATM-223ENST00000533979 GPR25O00155 361 aa8.96□□□□□ -0.98
ATM-223ENST00000533979 THBS1P07996 1170 aa8.96□□□□□ -0.98
ATM-223ENST00000533979 NOS2P35228 1153 aa8.96□□□□□ -0.98
ATM-223ENST00000533979 PLA2G4AP47712 749 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms