RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
FOXRED1-216ENST00000533839 GNPATO15228 680 aa12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 FCHSD2O94868 740 aa12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 MTHFSDQ2M296 383 aaKnown RBP12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
FOXRED1-216ENST00000533839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 GNAT3A8MTJ3 354 aa12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 PHF14O94880 888 aa12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 ADRA2BP18089 450 aa12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 TEFQ10587 303 aa12.83□□□□□ -0.36
FOXRED1-216ENST00000533839 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 RFC4P35249 363 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 GPR162Q16538 588 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
FOXRED1-216ENST00000533839 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 ITPK1Q13572 414 aa12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 RALBP1Q15311 655 aa12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 TEX13AQ9BXU3 409 aaPredicted RBP12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
FOXRED1-216ENST00000533839 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
FOXRED1-216ENST00000533839 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
FOXRED1-216ENST00000533839 SHANK3Q9BYB0 1731 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 YY1P25490 414 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
FOXRED1-216ENST00000533839 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 STARD3NLO95772 234 aa12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 DDX10Q13206 875 aaKnown RBP12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 LY75O60449 1722 aa12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
FOXRED1-216ENST00000533839 CASZ1Q86V15 1759 aa12.77□□□□□ -0.36
FOXRED1-216ENST00000533839 ZPR1O75312 459 aa12.77□□□□□ -0.37
FOXRED1-216ENST00000533839 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
FOXRED1-216ENST00000533839 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
FOXRED1-216ENST00000533839 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
FOXRED1-216ENST00000533839 PAPPAQ13219 1627 aa12.77□□□□□ -0.37
FOXRED1-216ENST00000533839 CRKLP46109 303 aaKnown RBP12.76□□□□□ -0.37
FOXRED1-216ENST00000533839 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
FOXRED1-216ENST00000533839 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
FOXRED1-216ENST00000533839 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
FOXRED1-216ENST00000533839 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
FOXRED1-216ENST00000533839 ITGB4P16144 1822 aa12.75□□□□□ -0.37
FOXRED1-216ENST00000533839 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
FOXRED1-216ENST00000533839 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
FOXRED1-216ENST00000533839 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
FOXRED1-216ENST00000533839 A0A087WZG4 1122 aa12.74□□□□□ -0.37
FOXRED1-216ENST00000533839 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
FOXRED1-216ENST00000533839 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
FOXRED1-216ENST00000533839 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
FOXRED1-216ENST00000533839 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
FOXRED1-216ENST00000533839 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
FOXRED1-216ENST00000533839 MMP10P09238 476 aa12.73□□□□□ -0.37
FOXRED1-216ENST00000533839 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
FOXRED1-216ENST00000533839 TGFB2P61812 414 aa12.72□□□□□ -0.37
FOXRED1-216ENST00000533839 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
FOXRED1-216ENST00000533839 SMIM5Q71RC9 77 aa12.72□□□□□ -0.37
FOXRED1-216ENST00000533839 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
FOXRED1-216ENST00000533839 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
FOXRED1-216ENST00000533839 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
FOXRED1-216ENST00000533839 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
FOXRED1-216ENST00000533839 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.38
FOXRED1-216ENST00000533839 C5P01031 1676 aa12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 GYS1P13807 737 aa12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 AMIGO3Q86WK7 504 aa12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
FOXRED1-216ENST00000533839 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
FOXRED1-216ENST00000533839 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
FOXRED1-216ENST00000533839 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
FOXRED1-216ENST00000533839 MCM10Q7L590 875 aa12.69□□□□□ -0.38
FOXRED1-216ENST00000533839 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
FOXRED1-216ENST00000533839 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
FOXRED1-216ENST00000533839 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
FOXRED1-216ENST00000533839 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
FOXRED1-216ENST00000533839 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
FOXRED1-216ENST00000533839 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
FOXRED1-216ENST00000533839 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
FOXRED1-216ENST00000533839 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
FOXRED1-216ENST00000533839 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 ZNF330Q9Y3S2 320 aaPredicted RBP12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
FOXRED1-216ENST00000533839 TM4SF1P30408 202 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms