RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
TSKU-204ENST00000533752 RNMTO43148 476 aaKnown RBP21.08■□□□□ 0.97
TSKU-204ENST00000533752 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
TSKU-204ENST00000533752 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.97
TSKU-204ENST00000533752 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.97
TSKU-204ENST00000533752 SPON1Q9HCB6 807 aa21.08■□□□□ 0.97
TSKU-204ENST00000533752 TFCP2L1Q9NZI6 479 aa21.08■□□□□ 0.97
TSKU-204ENST00000533752 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
TSKU-204ENST00000533752 ZNF831Q5JPB2 1677 aa21.06■□□□□ 0.96
TSKU-204ENST00000533752 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
TSKU-204ENST00000533752 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
TSKU-204ENST00000533752 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
TSKU-204ENST00000533752 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
TSKU-204ENST00000533752 ATP6V1AP38606 617 aa21.04■□□□□ 0.96
TSKU-204ENST00000533752 FLAD1Q8NFF5 587 aa21.03■□□□□ 0.96
TSKU-204ENST00000533752 SLC16A10Q8TF71 515 aa21.03■□□□□ 0.96
TSKU-204ENST00000533752 AK7Q96M32 723 aa21.03■□□□□ 0.96
TSKU-204ENST00000533752 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
TSKU-204ENST00000533752 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
TSKU-204ENST00000533752 PNPLA7Q6ZV29 1317 aa21.03■□□□□ 0.96
TSKU-204ENST00000533752 TEFQ10587 303 aa21.02■□□□□ 0.96
TSKU-204ENST00000533752 RTF1Q92541 710 aaKnown RBP21.02■□□□□ 0.96
TSKU-204ENST00000533752 RBM42Q9BTD8 480 aaKnown RBP21.02■□□□□ 0.96
TSKU-204ENST00000533752 PDGFDQ9GZP0 370 aaPredicted RBP21.02■□□□□ 0.96
TSKU-204ENST00000533752 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
TSKU-204ENST00000533752 CEMIPQ8WUJ3 1361 aa21.01■□□□□ 0.95
TSKU-204ENST00000533752 ZBTB7AO95365 584 aa21.01■□□□□ 0.95
TSKU-204ENST00000533752 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
TSKU-204ENST00000533752 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
TSKU-204ENST00000533752 ITPK1Q13572 414 aa21■□□□□ 0.95
TSKU-204ENST00000533752 LINC00116Q8NCU8 138 aa21■□□□□ 0.95
TSKU-204ENST00000533752 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
TSKU-204ENST00000533752 IL17REQ8NFR9 667 aa20.99■□□□□ 0.95
TSKU-204ENST00000533752 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
TSKU-204ENST00000533752 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
TSKU-204ENST00000533752 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
TSKU-204ENST00000533752 PPP1R1BQ9UD71 204 aaPredicted RBP20.98■□□□□ 0.95
TSKU-204ENST00000533752 SSFA2P28290 1259 aa20.97■□□□□ 0.95
TSKU-204ENST00000533752 TTC5Q8N0Z6 440 aa20.97■□□□□ 0.95
TSKU-204ENST00000533752 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
TSKU-204ENST00000533752 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
TSKU-204ENST00000533752 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
TSKU-204ENST00000533752 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
TSKU-204ENST00000533752 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
TSKU-204ENST00000533752 KCPQ6ZWJ8 1503 aa20.95■□□□□ 0.94
TSKU-204ENST00000533752 UBR3Q6ZT12 1888 aa20.95■□□□□ 0.94
TSKU-204ENST00000533752 GNPATO15228 680 aa20.95■□□□□ 0.94
TSKU-204ENST00000533752 MSH5O43196 834 aa20.95■□□□□ 0.94
TSKU-204ENST00000533752 NFE2L2Q16236 605 aa20.95■□□□□ 0.94
TSKU-204ENST00000533752 ATF5Q9Y2D1 282 aaPredicted RBP20.95■□□□□ 0.94
TSKU-204ENST00000533752 PTGER2P43116 358 aa20.94■□□□□ 0.94
TSKU-204ENST00000533752 COL23A1Q86Y22 540 aaPredicted RBP20.94■□□□□ 0.94
TSKU-204ENST00000533752 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
TSKU-204ENST00000533752 TJP1Q07157 1748 aa20.93■□□□□ 0.94
TSKU-204ENST00000533752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
TSKU-204ENST00000533752 ANP32CO43423 234 aa20.93■□□□□ 0.94
TSKU-204ENST00000533752 POLD1P28340 1107 aa20.93■□□□□ 0.94
TSKU-204ENST00000533752 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
TSKU-204ENST00000533752 VSIG10Q8N0Z9 540 aa20.93■□□□□ 0.94
TSKU-204ENST00000533752 ADRA2BP18089 450 aa20.92■□□□□ 0.94
TSKU-204ENST00000533752 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
TSKU-204ENST00000533752 MCM10Q7L590 875 aa20.92■□□□□ 0.94
TSKU-204ENST00000533752 RTCBQ9Y3I0 505 aaKnown RBP20.92■□□□□ 0.94
TSKU-204ENST00000533752 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
TSKU-204ENST00000533752 PHF14O94880 888 aa20.91■□□□□ 0.94
TSKU-204ENST00000533752 SGIP1Q9BQI5 828 aa20.91■□□□□ 0.94
TSKU-204ENST00000533752 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
TSKU-204ENST00000533752 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
TSKU-204ENST00000533752 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
TSKU-204ENST00000533752 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
TSKU-204ENST00000533752 HEG1Q9ULI3 1381 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 RPS6KA4O75676 772 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 DNAJC10Q8IXB1 793 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
TSKU-204ENST00000533752 DCTN1Q14203 1278 aa20.87■□□□□ 0.93
TSKU-204ENST00000533752 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
TSKU-204ENST00000533752 ARXQ96QS3 562 aa20.87■□□□□ 0.93
TSKU-204ENST00000533752 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
TSKU-204ENST00000533752 STARD3NLO95772 234 aa20.86■□□□□ 0.93
TSKU-204ENST00000533752 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
TSKU-204ENST00000533752 PNISRQ8TF01 805 aaKnown RBP20.86■□□□□ 0.93
TSKU-204ENST00000533752 ZNF496Q96IT1 587 aaPredicted RBP20.86■□□□□ 0.93
TSKU-204ENST00000533752 CCDC87Q9NVE4 849 aa20.86■□□□□ 0.93
TSKU-204ENST00000533752 ADAMTS8Q9UP79 889 aa20.86■□□□□ 0.93
TSKU-204ENST00000533752 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
TSKU-204ENST00000533752 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
TSKU-204ENST00000533752 RIPK4P57078 832 aa20.85■□□□□ 0.93
TSKU-204ENST00000533752 MYH14Q7Z406 1995 aaKnown RBP20.85■□□□□ 0.93
TSKU-204ENST00000533752 CCDC146Q8IYE0 955 aa20.84■□□□□ 0.93
TSKU-204ENST00000533752 RFC4P35249 363 aa20.83■□□□□ 0.93
TSKU-204ENST00000533752 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
TSKU-204ENST00000533752 INTS5Q6P9B9 1019 aaKnown RBP20.83■□□□□ 0.93
TSKU-204ENST00000533752 SMIM5Q71RC9 77 aa20.82■□□□□ 0.92
TSKU-204ENST00000533752 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
TSKU-204ENST00000533752 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
TSKU-204ENST00000533752 FHDC1Q9C0D6 1143 aaPredicted RBP20.81■□□□□ 0.92
TSKU-204ENST00000533752 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
TSKU-204ENST00000533752 KCNQ3O43525 872 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms