RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 FKBP4Q02790 459 aaKnown RBP eCLIP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 CNKSR2Q8WXI2 1034 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 NCOA1Q15788 1441 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 CAMSAP2Q08AD1 1489 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 MAGI1Q96QZ7 1491 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 KDM4AO75164 1064 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 MCM5P33992 734 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 AMOTQ4VCS5 1084 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 TOM1L2Q6ZVM7 507 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 UBXN4Q92575 508 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 IL1RAPL2Q9NP60 686 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-236ENST00000533667 ANKLE2Q86XL3 938 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 TANGO6Q9C0B7 1094 aa8.2□□□□□ -1.1
CTNND1-236ENST00000533667 MAP4K4O95819 1239 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-236ENST00000533667 SFPQP23246 707 aaKnown RBP eCLIP8.19□□□□□ -1.11e-8■■■□□ 15.1
CTNND1-236ENST00000533667 MCM3P25205 808 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 ARHGAP29Q52LW3 1261 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 ZNF397Q8NF99 534 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-236ENST00000533667 CCDC148Q8NFR7 591 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 SSH1Q8WYL5 1049 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 IL16Q14005 1332 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
CTNND1-236ENST00000533667 SYCE3A1L190 88 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 CAVIN2O95810 425 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 MYL6BP14649 208 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 IGHMBP2P38935 993 aaKnown RBP8.19□□□□□ -1.1
CTNND1-236ENST00000533667 RRS1Q15050 365 aaKnown RBP8.19□□□□□ -1.1
CTNND1-236ENST00000533667 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
CTNND1-236ENST00000533667 FAM177BA6PVY3 158 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 TAF7Q15545 349 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 TMEM132AQ24JP5 1023 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 TAF4BQ92750 862 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■□□□□ 10.1
CTNND1-236ENST00000533667 DDX19AQ9NUU7 478 aaKnown RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 LIMCH1Q9UPQ0 1083 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 ABCC5O15440 1437 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 CDK13Q14004 1512 aaKnown RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 KIF14Q15058 1648 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 STARD3NLO95772 234 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 PTPN14Q15678 1187 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 SEPT7Q16181 437 aaKnown RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 BMP2KLQ5H9B9 411 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 KIF18AQ8NI77 898 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 EXOC6BQ9Y2D4 811 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 FAM135AQ9P2D6 1515 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
CTNND1-236ENST00000533667 MAP9Q49MG5 647 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 TMCO3Q6UWJ1 677 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 STRN4Q9NRL3 753 aa8.18□□□□□ -1.1
CTNND1-236ENST00000533667 RPRD2Q5VT52 1461 aaKnown RBP8.17□□□□□ -1.1
CTNND1-236ENST00000533667 CTR9Q6PD62 1173 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 NUTM1Q86Y26 1132 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 KIAA1328Q86T90 577 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 PPP1R12BO60237 982 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-236ENST00000533667 DESP17661 470 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 UVSSAQ2YD98 709 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
CTNND1-236ENST00000533667 CCDC83Q8IWF9 413 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 RAI14Q9P0K7 980 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 TTC21BQ7Z4L5 1316 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 FGFR1OPO95684 399 aaKnown RBP8.17□□□□□ -1.1
CTNND1-236ENST00000533667 GSDMDP57764 484 aa8.17□□□□□ -1.1
CTNND1-236ENST00000533667 ZHX3Q9H4I2 956 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 HSP90AB3PQ58FF7 597 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 PYM1Q9BRP8 204 aaKnown RBP8.16□□□□□ -1.1
CTNND1-236ENST00000533667 HYPKQ9NX55 129 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 KIF5CO60282 957 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 IFIT1P09914 478 aaKnown RBP8.16□□□□□ -1.1
CTNND1-236ENST00000533667 DDX54Q8TDD1 881 aaKnown RBP8.16□□□□□ -1.1
CTNND1-236ENST00000533667 TBC1D2Q9BYX2 928 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 RNF41Q9H4P4 317 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-236ENST00000533667 BICRAQ9NZM4 1560 aa8.16□□□□□ -1.1
CTNND1-236ENST00000533667 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 IDH1O75874 414 aaKnown RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 KIF20AO95235 890 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 EZRP15311 586 aaKnown RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 CETN2P41208 172 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 ATP2B2Q01814 1243 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 SPA17Q15506 151 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 FKBP15Q5T1M5 1219 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 EVI5LQ96CN4 794 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 C8orf76Q96K31 380 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 ZNF652Q9Y2D9 606 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 GOLGA6L9A6NEM1 432 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 METTL24Q5JXM2 366 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 FAM177A1Q8N128 213 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 ARHGAP45Q92619 1136 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms