RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
COMMD9-208ENST00000533643 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
COMMD9-208ENST00000533643 CHL1O00533 1208 aa15.55■□□□□ 0.08
COMMD9-208ENST00000533643 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
COMMD9-208ENST00000533643 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
COMMD9-208ENST00000533643 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
COMMD9-208ENST00000533643 IFT57Q9NWB7 429 aa15.55■□□□□ 0.08
COMMD9-208ENST00000533643 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
COMMD9-208ENST00000533643 DOT1LQ8TEK3 1739 aa15.54■□□□□ 0.08
COMMD9-208ENST00000533643 BTBD11A6QL63 1104 aa15.54■□□□□ 0.08
COMMD9-208ENST00000533643 GNAI1P63096 354 aa15.54■□□□□ 0.08
COMMD9-208ENST00000533643 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
COMMD9-208ENST00000533643 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
COMMD9-208ENST00000533643 VIRMAQ69YN4 1812 aaKnown RBP15.53■□□□□ 0.08
COMMD9-208ENST00000533643 TRIM37O94972 964 aa15.53■□□□□ 0.08
COMMD9-208ENST00000533643 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
COMMD9-208ENST00000533643 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
COMMD9-208ENST00000533643 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.08
COMMD9-208ENST00000533643 E9PSI1 815 aa15.52■□□□□ 0.08
COMMD9-208ENST00000533643 KCNQ3O43525 872 aa15.52■□□□□ 0.08
COMMD9-208ENST00000533643 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
COMMD9-208ENST00000533643 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.08
COMMD9-208ENST00000533643 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
COMMD9-208ENST00000533643 ASAP1Q9ULH1 1129 aa15.52■□□□□ 0.08
COMMD9-208ENST00000533643 EP400Q96L91 3159 aa15.52■□□□□ 0.07
COMMD9-208ENST00000533643 ITGB4P16144 1822 aa15.52■□□□□ 0.07
COMMD9-208ENST00000533643 NHSQ6T4R5 1651 aa15.51■□□□□ 0.07
COMMD9-208ENST00000533643 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
COMMD9-208ENST00000533643 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
COMMD9-208ENST00000533643 SBF2Q86WG5 1849 aa15.51■□□□□ 0.07
COMMD9-208ENST00000533643 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
COMMD9-208ENST00000533643 MYH16Q9H6N6 1097 aa15.5■□□□□ 0.07
COMMD9-208ENST00000533643 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
COMMD9-208ENST00000533643 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
COMMD9-208ENST00000533643 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
COMMD9-208ENST00000533643 DUSP27Q5VZP5 1158 aa15.48■□□□□ 0.07
COMMD9-208ENST00000533643 ILDR2Q71H61 639 aa15.48■□□□□ 0.07
COMMD9-208ENST00000533643 TTC5Q8N0Z6 440 aa15.48■□□□□ 0.07
COMMD9-208ENST00000533643 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
COMMD9-208ENST00000533643 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
COMMD9-208ENST00000533643 KDM3BQ7LBC6 1761 aa15.47■□□□□ 0.07
COMMD9-208ENST00000533643 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
COMMD9-208ENST00000533643 BTAF1O14981 1849 aa15.46■□□□□ 0.07
COMMD9-208ENST00000533643 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
COMMD9-208ENST00000533643 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
COMMD9-208ENST00000533643 FMNL2Q96PY5 1086 aa15.46■□□□□ 0.07
COMMD9-208ENST00000533643 PALLDQ8WX93 1383 aa15.46■□□□□ 0.07
COMMD9-208ENST00000533643 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
COMMD9-208ENST00000533643 APBA3O96018 575 aa15.45■□□□□ 0.06
COMMD9-208ENST00000533643 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
COMMD9-208ENST00000533643 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
COMMD9-208ENST00000533643 SLC4A9Q96Q91 983 aa15.45■□□□□ 0.06
COMMD9-208ENST00000533643 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
COMMD9-208ENST00000533643 HEG1Q9ULI3 1381 aa15.45■□□□□ 0.06
COMMD9-208ENST00000533643 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
COMMD9-208ENST00000533643 PLSCR1O15162 318 aa15.43■□□□□ 0.06
COMMD9-208ENST00000533643 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
COMMD9-208ENST00000533643 SIK1P57059 783 aa15.43■□□□□ 0.06
COMMD9-208ENST00000533643 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
COMMD9-208ENST00000533643 UBR2Q8IWV8 1755 aa15.42■□□□□ 0.06
COMMD9-208ENST00000533643 PRAMEF22A3QJZ6 481 aa15.42■□□□□ 0.06
COMMD9-208ENST00000533643 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
COMMD9-208ENST00000533643 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
COMMD9-208ENST00000533643 VSIG10Q8N0Z9 540 aa15.42■□□□□ 0.06
COMMD9-208ENST00000533643 TNS1Q9HBL0 1735 aaKnown RBP15.42■□□□□ 0.06
COMMD9-208ENST00000533643 CCDC125Q86Z20 511 aa15.41■□□□□ 0.06
COMMD9-208ENST00000533643 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
COMMD9-208ENST00000533643 KCNQ4P56696 695 aa15.4■□□□□ 0.06
COMMD9-208ENST00000533643 SF3B2Q13435 895 aaKnown RBP15.4■□□□□ 0.06
COMMD9-208ENST00000533643 ITPK1Q13572 414 aa15.4■□□□□ 0.06
COMMD9-208ENST00000533643 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
COMMD9-208ENST00000533643 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
COMMD9-208ENST00000533643 PROM2Q8N271 834 aa15.4■□□□□ 0.06
COMMD9-208ENST00000533643 UPF1Q92900 1129 aaKnown RBP eCLIP15.4■□□□□ 0.06
COMMD9-208ENST00000533643 VAMP4O75379 141 aa15.39■□□□□ 0.05
COMMD9-208ENST00000533643 HOXB7P09629 217 aa15.39■□□□□ 0.05
COMMD9-208ENST00000533643 TXNRD1Q16881 649 aa15.39■□□□□ 0.05
COMMD9-208ENST00000533643 CAMKK2Q96RR4 588 aa15.39■□□□□ 0.05
COMMD9-208ENST00000533643 CCNL1Q9UK58 526 aaPredicted RBP15.39■□□□□ 0.05
COMMD9-208ENST00000533643 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
COMMD9-208ENST00000533643 SOS1Q07889 1333 aaPredicted RBP15.39■□□□□ 0.05
COMMD9-208ENST00000533643 EN1Q05925 392 aaPredicted RBP15.38■□□□□ 0.05
COMMD9-208ENST00000533643 TEX13AQ9BXU3 409 aaPredicted RBP15.38■□□□□ 0.05
COMMD9-208ENST00000533643 LRRC4BQ9NT99 713 aa15.38■□□□□ 0.05
COMMD9-208ENST00000533643 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
COMMD9-208ENST00000533643 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
COMMD9-208ENST00000533643 BAG6P46379 1132 aa15.37■□□□□ 0.05
COMMD9-208ENST00000533643 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
COMMD9-208ENST00000533643 DEFB132Q7Z7B7 95 aa15.37■□□□□ 0.05
COMMD9-208ENST00000533643 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
COMMD9-208ENST00000533643 LY75O60449 1722 aa15.37■□□□□ 0.05
COMMD9-208ENST00000533643 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
COMMD9-208ENST00000533643 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
COMMD9-208ENST00000533643 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
COMMD9-208ENST00000533643 C5P01031 1676 aa15.35■□□□□ 0.05
COMMD9-208ENST00000533643 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
COMMD9-208ENST00000533643 TJP1Q07157 1748 aa15.35■□□□□ 0.05
COMMD9-208ENST00000533643 STARD3NLO95772 234 aa15.35■□□□□ 0.05
COMMD9-208ENST00000533643 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
COMMD9-208ENST00000533643 A1BGP04217 495 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms