RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TMEM229AB2RXF0 380 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 SPATA31C2B4DYI2 1134 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 CLDN10P78369 228 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 TLR1Q15399 786 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 GNASQ5JWF2 1037 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 TMEM214Q6NUQ4 689 aaKnown RBP5.44□□□□□ -1.54
ATM-220ENST00000533526 SIX5Q8N196 739 aa5.44□□□□□ -1.54
ATM-220ENST00000533526 NXF1Q9UBU9 619 aaKnown RBP5.44□□□□□ -1.54
ATM-220ENST00000533526 A6NJY4 79 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 SOBPA7XYQ1 873 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 CDK2AP1O14519 115 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 SEC13P55735 322 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 PTSQ03393 145 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 PTK7Q13308 1070 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 MTFR1Q15390 333 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 TAS1R3Q7RTX0 852 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 PPARGC1BQ86YN6 1023 aaKnown RBP5.43□□□□□ -1.54
ATM-220ENST00000533526 NBPF15Q8N660 670 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATM-220ENST00000533526 TPCN2Q8NHX9 752 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 SLC16A10Q8TF71 515 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 FHDC1Q9C0D6 1143 aaPredicted RBP5.43□□□□□ -1.54
ATM-220ENST00000533526 SERTAD1Q9UHV2 236 aa5.43□□□□□ -1.54
ATM-220ENST00000533526 SLC35F4A4IF30 521 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 POU4F2Q12837 409 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 NBPF10Q6P3W6 841 aaKnown RBP5.42□□□□□ -1.54
ATM-220ENST00000533526 CCDC82Q8N4S0 544 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 RHBDD1Q8TEB9 315 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 PBXIP1Q96AQ6 731 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 ZNF358Q9NW07 568 aa5.42□□□□□ -1.54
ATM-220ENST00000533526 USP17L15C9J2P7 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L10C9JJH3 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L13C9JLJ4 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L12C9JPN9 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L11C9JVI0 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L21D6R901 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L18D6R9N7 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L22D6RA61 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L17D6RBQ6 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L19D6RCP7 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L20D6RJB6 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 SUPT5HO00267 1087 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 TERTO14746 1132 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 PPP1R15AO75807 674 aaPredicted RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 DKK1O94907 266 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 STAU1O95793 577 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 USP17L24Q0WX57 530 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 ELOAQ14241 798 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 CRTC2Q53ET0 693 aaPredicted RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 ANKMY2Q8IV38 441 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 ZNF594Q96JF6 807 aaPredicted RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 NIFKQ9BYG3 293 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 TIMMDC1Q9NPL8 285 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 KIAA1024Q9UPX6 916 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 DYRK1BQ9Y463 629 aa5.41□□□□□ -1.54
ATM-220ENST00000533526 ACIN1Q9UKV3 1341 aaKnown RBP5.41□□□□□ -1.54
ATM-220ENST00000533526 PPFIA3O75145 1194 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 ATG7O95352 703 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 DPYDQ12882 1025 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 CDCA8Q53HL2 280 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 CCDC155Q8N6L0 562 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 GAS2L2Q8NHY3 880 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 FAM200AQ8TCP9 573 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 ZNF775Q96BV0 537 aaPredicted RBP5.4□□□□□ -1.54
ATM-220ENST00000533526 GMCL1Q96IK5 515 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 C1orf115Q9H7X2 142 aa5.4□□□□□ -1.54
ATM-220ENST00000533526 A0A1B0GTH6 734 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 SFI1A8K8P3 1242 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 H7C1W4 665 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 RHOQP17081 205 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 C4orf17Q53FE4 359 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 CABP1Q9NZU7 370 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 SCHIP1Q9P0W5 487 aaPredicted RBP5.39□□□□□ -1.55
ATM-220ENST00000533526 CHMP3Q9Y3E7 222 aa5.39□□□□□ -1.55
ATM-220ENST00000533526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.38□□□□□ -1.55
ATM-220ENST00000533526 SENP3-EIF4A1A0A087X0R7 540 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 F11P03951 625 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 EPHA4P54764 986 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 TNS4Q8IZW8 715 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 C1orf216Q8TAB5 229 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 IRF7Q92985 503 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 HINFPQ9BQA5 517 aa5.38□□□□□ -1.55
ATM-220ENST00000533526 IQSEC3Q9UPP2 1182 aaPredicted RBP5.38□□□□□ -1.55
ATM-220ENST00000533526 H3BM21 787 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 WFS1O76024 890 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 ITGA6P23229 1130 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 PHKA2P46019 1235 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 PSMA6P60900 246 aaKnown RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 FOXK2Q01167 660 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 LBRQ14739 615 aaKnown RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 TEAD4Q15561 434 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 TREML4Q6UXN2 200 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 SLC9A9Q8IVB4 645 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 TSEN2Q8NCE0 465 aaKnown RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 NANOS1Q8WY41 292 aaKnown RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 ARXQ96QS3 562 aa5.37□□□□□ -1.55
ATM-220ENST00000533526 GAS2L1Q99501 681 aaPredicted RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 NOVA2Q9UNW9 492 aaKnown RBP5.37□□□□□ -1.55
ATM-220ENST00000533526 SERTM1A2A2V5 107 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms