RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 PIGBQ92521 554 aa10.4□□□□□ -0.74
COMMD9-207ENST00000533308 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.741e-8■■■■■ 31.7
COMMD9-207ENST00000533308 SLC52A2Q9HAB3 445 aa10.4□□□□□ -0.74
COMMD9-207ENST00000533308 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.75
COMMD9-207ENST00000533308 KCNQ3O43525 872 aa10.39□□□□□ -0.75
COMMD9-207ENST00000533308 CABP4P57796 275 aa10.39□□□□□ -0.75
COMMD9-207ENST00000533308 DEFB132Q7Z7B7 95 aa10.39□□□□□ -0.75
COMMD9-207ENST00000533308 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
COMMD9-207ENST00000533308 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
COMMD9-207ENST00000533308 TMOD3Q9NYL9 352 aa10.39□□□□□ -0.75
COMMD9-207ENST00000533308 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
COMMD9-207ENST00000533308 ERVV-2B6SEH9 535 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 RTF1Q92541 710 aaKnown RBP10.38□□□□□ -0.75
COMMD9-207ENST00000533308 ATG3Q9NT62 314 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 ASAP1Q9ULH1 1129 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
COMMD9-207ENST00000533308 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
COMMD9-207ENST00000533308 CICQ96RK0 1608 aaPredicted RBP10.37□□□□□ -0.75
COMMD9-207ENST00000533308 HTATSF1O43719 755 aaKnown RBP10.37□□□□□ -0.75
COMMD9-207ENST00000533308 APBA3O96018 575 aa10.37□□□□□ -0.75
COMMD9-207ENST00000533308 KCNQ4P56696 695 aa10.37□□□□□ -0.75
COMMD9-207ENST00000533308 TEFQ10587 303 aa10.37□□□□□ -0.75
COMMD9-207ENST00000533308 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
COMMD9-207ENST00000533308 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
COMMD9-207ENST00000533308 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.75
COMMD9-207ENST00000533308 EN1Q05925 392 aaPredicted RBP10.36□□□□□ -0.75
COMMD9-207ENST00000533308 LMOD3Q0VAK6 560 aa10.36□□□□□ -0.75
COMMD9-207ENST00000533308 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
COMMD9-207ENST00000533308 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
COMMD9-207ENST00000533308 ZNF831Q5JPB2 1677 aa10.36□□□□□ -0.75
COMMD9-207ENST00000533308 EZH2Q15910 746 aaKnown RBP10.35□□□□□ -0.75
COMMD9-207ENST00000533308 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
COMMD9-207ENST00000533308 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
COMMD9-207ENST00000533308 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
COMMD9-207ENST00000533308 KRT24Q2M2I5 525 aa10.34□□□□□ -0.75
COMMD9-207ENST00000533308 PROM2Q8N271 834 aa10.34□□□□□ -0.75
COMMD9-207ENST00000533308 YTHDC1Q96MU7 727 aaKnown RBP10.34□□□□□ -0.75
COMMD9-207ENST00000533308 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
COMMD9-207ENST00000533308 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
COMMD9-207ENST00000533308 PRAMEF22A3QJZ6 481 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
COMMD9-207ENST00000533308 ITPK1Q13572 414 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 TAF7Q15545 349 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-207ENST00000533308 ZNF790Q6PG37 636 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
COMMD9-207ENST00000533308 ZNF496Q96IT1 587 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-207ENST00000533308 CAMKK2Q96RR4 588 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 MBIPQ9NS73 344 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 LRRC4BQ9NT99 713 aa10.33□□□□□ -0.76
COMMD9-207ENST00000533308 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 BAG6P46379 1132 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
COMMD9-207ENST00000533308 TXNRD1Q16881 649 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 CDCA7LQ96GN5 454 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
COMMD9-207ENST00000533308 TSPYL4Q9UJ04 414 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 UBR3Q6ZT12 1888 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 FANCIQ9NVI1 1328 aa10.32□□□□□ -0.76
COMMD9-207ENST00000533308 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 CHL1O00533 1208 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 SIK1P57059 783 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 TTC5Q8N0Z6 440 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
COMMD9-207ENST00000533308 IFT57Q9NWB7 429 aa10.31□□□□□ -0.76
COMMD9-207ENST00000533308 C4AP0C0L4 1744 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 SOCS7O14512 581 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 PLSCR1O15162 318 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
COMMD9-207ENST00000533308 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
COMMD9-207ENST00000533308 SMIM5Q71RC9 77 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 AMIGO3Q86WK7 504 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 DNAJC10Q8IXB1 793 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
COMMD9-207ENST00000533308 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 CCNL1Q9UK58 526 aaPredicted RBP10.3□□□□□ -0.76
COMMD9-207ENST00000533308 ZBED9Q6R2W3 1325 aa10.3□□□□□ -0.76
COMMD9-207ENST00000533308 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 ZNF827Q17R98 1081 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 WDR63Q8IWG1 891 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 QSER1Q2KHR3 1735 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 IL16Q14005 1332 aa10.29□□□□□ -0.76
COMMD9-207ENST00000533308 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
COMMD9-207ENST00000533308 GNAI1P63096 354 aa10.28□□□□□ -0.76
COMMD9-207ENST00000533308 CALD1Q05682 793 aaKnown RBP10.28□□□□□ -0.76
COMMD9-207ENST00000533308 TSPYL6Q8N831 410 aa10.28□□□□□ -0.76
COMMD9-207ENST00000533308 C8orf58Q8NAV2 365 aa10.28□□□□□ -0.76
COMMD9-207ENST00000533308 FMNL2Q96PY5 1086 aa10.28□□□□□ -0.76
COMMD9-207ENST00000533308 CASZ1Q86V15 1759 aa10.27□□□□□ -0.77
COMMD9-207ENST00000533308 GOLGA2Q08379 1002 aa10.27□□□□□ -0.77
COMMD9-207ENST00000533308 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
COMMD9-207ENST00000533308 NGEFQ8N5V2 710 aa10.27□□□□□ -0.77
COMMD9-207ENST00000533308 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
COMMD9-207ENST00000533308 ELL2O00472 640 aaPredicted RBP10.26□□□□□ -0.77
COMMD9-207ENST00000533308 GIGYF1O75420 1035 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms