RNA–Protein interactions for RNA: ENST00000533302.5

TRIM29-220, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-220ENST00000533302 SLIT1O75093 1534 aa7.98□□□□□ -1.13
TRIM29-220ENST00000533302 EHBP1L1Q8N3D4 1523 aa7.98□□□□□ -1.13
TRIM29-220ENST00000533302 MSH6P52701 1360 aa7.97□□□□□ -1.13
TRIM29-220ENST00000533302 SPSB2Q99619 263 aa7.97□□□□□ -1.13
TRIM29-220ENST00000533302 SLC52A1Q9NWF4 448 aa7.97□□□□□ -1.13
TRIM29-220ENST00000533302 SPATA31A6Q5VVP1 1343 aa7.97□□□□□ -1.13
TRIM29-220ENST00000533302 RNF17Q9BXT8 1623 aaKnown RBP7.96□□□□□ -1.13
TRIM29-220ENST00000533302 TLL1O43897 1013 aa7.96□□□□□ -1.14
TRIM29-220ENST00000533302 DXOO77932 396 aaKnown RBP7.96□□□□□ -1.14
TRIM29-220ENST00000533302 RXRBP28702 533 aa7.96□□□□□ -1.14
TRIM29-220ENST00000533302 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
TRIM29-220ENST00000533302 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
TRIM29-220ENST00000533302 IQGAP1P46940 1657 aa7.95□□□□□ -1.14
TRIM29-220ENST00000533302 MMP16P51512 607 aa7.95□□□□□ -1.14
TRIM29-220ENST00000533302 KANK4Q5T7N3 995 aaPredicted RBP7.95□□□□□ -1.14
TRIM29-220ENST00000533302 FKBPLQ9UIM3 349 aa7.95□□□□□ -1.14
TRIM29-220ENST00000533302 SYNMO15061 1565 aa7.95□□□□□ -1.14
TRIM29-220ENST00000533302 KANK1Q14678 1352 aa7.95□□□□□ -1.14
TRIM29-220ENST00000533302 ARHGEF5Q12774 1597 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 ZPR1O75312 459 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 CCNYL3P0C7X3 344 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 CTHP32929 405 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 NYAP1Q6ZVC0 841 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 MTRQ99707 1265 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 C19orf44Q9H6X5 657 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 TBX22Q9Y458 520 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 MYOM3Q5VTT5 1437 aa7.94□□□□□ -1.14
TRIM29-220ENST00000533302 ADH1BP00325 375 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 ATF3P18847 181 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 PTPN5P54829 565 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 NR1H3Q13133 447 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 CDAN1Q8IWY9 1227 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 LRRC9Q6ZRR7 1453 aa7.93□□□□□ -1.14
TRIM29-220ENST00000533302 PRDM15P57071 1507 aaPredicted RBP7.93□□□□□ -1.14
TRIM29-220ENST00000533302 POLR1AO95602 1720 aaPredicted RBP7.92□□□□□ -1.14
TRIM29-220ENST00000533302 PPP1R15AO75807 674 aaPredicted RBP7.92□□□□□ -1.14
TRIM29-220ENST00000533302 SOX11P35716 441 aa7.92□□□□□ -1.14
TRIM29-220ENST00000533302 TJAP1Q5JTD0 557 aa7.92□□□□□ -1.14
TRIM29-220ENST00000533302 ZNF516Q92618 1163 aa7.92□□□□□ -1.14
TRIM29-220ENST00000533302 ERBINQ96RT1 1412 aa7.92□□□□□ -1.14
TRIM29-220ENST00000533302 DUOX2Q9NRD8 1548 aa7.92□□□□□ -1.14
TRIM29-220ENST00000533302 PALM3A6NDB9 673 aaPredicted RBP7.91□□□□□ -1.14
TRIM29-220ENST00000533302 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 PDIA4P13667 645 aaKnown RBP7.91□□□□□ -1.14
TRIM29-220ENST00000533302 RFX1P22670 979 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 TRIM26Q12899 539 aaPredicted RBP7.91□□□□□ -1.14
TRIM29-220ENST00000533302 SEMA3FQ13275 785 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 POTEGQ6S5H5 508 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
TRIM29-220ENST00000533302 ZC3H4Q9UPT8 1303 aaKnown RBP7.91□□□□□ -1.14
TRIM29-220ENST00000533302 ABCC5O15440 1437 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 FGD6Q6ZV73 1430 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 NCOA3Q9Y6Q9 1424 aa7.91□□□□□ -1.14
TRIM29-220ENST00000533302 STRCP1A6NGW2 1772 aa7.9□□□□□ -1.14
TRIM29-220ENST00000533302 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
TRIM29-220ENST00000533302 NKTRP30414 1462 aaKnown RBP7.9□□□□□ -1.14
TRIM29-220ENST00000533302 PLEKHG1Q9ULL1 1385 aa7.9□□□□□ -1.14
TRIM29-220ENST00000533302 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.9□□□□□ -1.14
TRIM29-220ENST00000533302 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
TRIM29-220ENST00000533302 RETREG2Q8NC44 543 aa7.9□□□□□ -1.14
TRIM29-220ENST00000533302 CHIC2Q9UKJ5 165 aa7.9□□□□□ -1.14
TRIM29-220ENST00000533302 TET3O43151 1660 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 EFCAB6Q5THR3 1501 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 NOS1P29475 1434 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 SRPK2P78362 688 aaKnown RBP7.89□□□□□ -1.15
TRIM29-220ENST00000533302 BRINP3Q76B58 766 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 PBXIP1Q96AQ6 731 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 QTRT2Q9H974 415 aaKnown RBP7.89□□□□□ -1.15
TRIM29-220ENST00000533302 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
TRIM29-220ENST00000533302 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
TRIM29-220ENST00000533302 ZC3H13Q5T200 1668 aaKnown RBP7.89□□□□□ -1.15
TRIM29-220ENST00000533302 MAST1Q9Y2H9 1570 aa7.88□□□□□ -1.15
TRIM29-220ENST00000533302 ANKRD30AQ9BXX3 1397 aa7.88□□□□□ -1.15
TRIM29-220ENST00000533302 RBM6P78332 1123 aaKnown RBP7.88□□□□□ -1.15
TRIM29-220ENST00000533302 PTCRAQ6ISU1 281 aaPredicted RBP7.88□□□□□ -1.15
TRIM29-220ENST00000533302 LRRC59Q96AG4 307 aaKnown RBP7.88□□□□□ -1.15
TRIM29-220ENST00000533302 AMOTL2Q9Y2J4 779 aa7.88□□□□□ -1.15
TRIM29-220ENST00000533302 LRP6O75581 1613 aa7.88□□□□□ -1.15
TRIM29-220ENST00000533302 MROH1Q8NDA8 1641 aa7.88□□□□□ -1.15
TRIM29-220ENST00000533302 AFF2P51816 1311 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
TRIM29-220ENST00000533302 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 TBC1D9Q6ZT07 1266 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 CCDC24Q8N4L8 307 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 SLC6A16Q9GZN6 736 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 UNC93B1Q9H1C4 597 aa7.87□□□□□ -1.15
TRIM29-220ENST00000533302 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
TRIM29-220ENST00000533302 UBR1Q8IWV7 1749 aa7.86□□□□□ -1.15
TRIM29-220ENST00000533302 PIK3R4Q99570 1358 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms