RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	TRAK2	O60296	914 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	PTK2	Q05397	1052 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	PDXDC2P	Q6P474	469 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	LRP8	Q14114	963 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	NKAPL	Q5M9Q1	402 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	LYSMD3	Q7Z3D4	306 aa		6.62	□□□□□ -1.35
LMO7-223	ENST00000533299	DBN1	Q16643	649 aa		6.61	□□□□□ -1.35
LMO7-223	ENST00000533299	GDF2	Q9UK05	429 aa	Predicted RBP	6.61	□□□□□ -1.35
LMO7-223	ENST00000533299	ZBBX	A8MT70	800 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	FNBP4	Q8N3X1	1017 aa	Predicted RBP	6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	AGBL1	Q96MI9	1066 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	PAX4	O43316	350 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	SOX11	P35716	441 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	EIF4G2	P78344	907 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	RELB	Q01201	579 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	DHX9	Q08211	1270 aa	Known RBP	6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	NR1H3	Q13133	447 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	MCTP1	Q6DN14	999 aa		6.6	□□□□□ -1.35
LMO7-223	ENST00000533299	HOXB4	P17483	251 aa	Predicted RBP	6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	MCCD1	P59942	119 aa	Predicted RBP	6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	ZBTB33	Q86T24	672 aa		6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	EDARADD	Q8WWZ3	215 aa		6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	GTPBP3	Q969Y2	492 aa	Known RBP	6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	ARHGAP9	Q9BRR9	750 aa		6.59	□□□□□ -1.35
LMO7-223	ENST00000533299	IRF5	Q13568	498 aa		6.58	□□□□□ -1.36
LMO7-223	ENST00000533299	FMNL2	Q96PY5	1086 aa		6.57	□□□□□ -1.36
LMO7-223	ENST00000533299	SUPT5H	O00267	1087 aa	Known RBP	6.57	□□□□□ -1.36
LMO7-223	ENST00000533299	DYRK3	O43781	588 aa		6.57	□□□□□ -1.36
LMO7-223	ENST00000533299	VAC14	Q08AM6	782 aa		6.57	□□□□□ -1.36
LMO7-223	ENST00000533299	SEMA3F	Q13275	785 aa		6.57	□□□□□ -1.36
LMO7-223	ENST00000533299	FZD5	Q13467	585 aa		6.56	□□□□□ -1.36
LMO7-223	ENST00000533299	ZNF777	Q9ULD5	760 aa	Predicted RBP	6.56	□□□□□ -1.36
LMO7-223	ENST00000533299	MAGEB6P1	A0A0J9YX57	407 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	GPR37L1	O60883	481 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	FBXO45	P0C2W1	286 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	SH3BP5L	Q7L8J4	393 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	GOLGA6L1	Q8N7Z2	621 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	CALR3	Q96L12	384 aa	Known RBP	6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	CFHR5	Q9BXR6	569 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	RIPOR1	Q6ZS17	1223 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	KLRG1	Q96E93	195 aa		6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	CDV3	Q9UKY7	258 aa	Known RBP	6.55	□□□□□ -1.36
LMO7-223	ENST00000533299	HYAL3	O43820	417 aa	Predicted RBP	6.54	□□□□□ -1.36
LMO7-223	ENST00000533299	DZIP3	Q86Y13	1208 aa	Known RBP	6.54	□□□□□ -1.36
LMO7-223	ENST00000533299	ADAM32	Q8TC27	787 aa		6.54	□□□□□ -1.36
LMO7-223	ENST00000533299	CARD14	Q9BXL6	1004 aa		6.54	□□□□□ -1.36
LMO7-223	ENST00000533299	DYRK1B	Q9Y463	629 aa		6.54	□□□□□ -1.36
LMO7-223	ENST00000533299	CCDC97	Q96F63	343 aa	Predicted RBP	6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	PCDHB9	Q9Y5E1	797 aa		6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	RNF144A	P50876	292 aa	Predicted RBP	6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	HDGFL1	Q5TGJ6	251 aa		6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	GLMN	Q92990	594 aa		6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	SLC10A4	Q96EP9	437 aa		6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	SERPINA10	Q9UK55	444 aa		6.53	□□□□□ -1.36
LMO7-223	ENST00000533299	COL17A1	Q9UMD9	1497 aa	Predicted RBP	6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	POM121C	A8CG34	1229 aa		6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	AMPD1	P23109	780 aa		6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	PTGIR	P43119	386 aa		6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	PRSS36	Q5K4E3	855 aa		6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	TRIM52	Q96A61	297 aa		6.52	□□□□□ -1.37
LMO7-223	ENST00000533299	ARID3C	A6NKF2	412 aa		6.51	□□□□□ -1.37
LMO7-223	ENST00000533299	ADH1A	P07327	375 aa		6.51	□□□□□ -1.37
LMO7-223	ENST00000533299	NBPF20	Q3BBV1	942 aa		6.51	□□□□□ -1.37
LMO7-223	ENST00000533299	ALG2	Q9H553	416 aa		6.51	□□□□□ -1.37
LMO7-223	ENST00000533299	LAMC2	Q13753	1193 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	ERFE	Q4G0M1	354 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	CCDC125	Q86Z20	511 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	RNF20	Q5VTR2	975 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	SLCO4C1	Q6ZQN7	724 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	TPSG1	Q9NRR2	321 aa		6.5	□□□□□ -1.37
LMO7-223	ENST00000533299	RHOQ	P17081	205 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	DGKG	P49619	791 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	SLFNL1	Q499Z3	407 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	BTBD6	Q96KE9	485 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	KCTD15	Q96SI1	283 aa	Predicted RBP	6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	OCSTAMP	Q9BR26	566 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	PHF24	Q9UPV7	400 aa		6.49	□□□□□ -1.37
LMO7-223	ENST00000533299	PRICKLE2	Q7Z3G6	844 aa		6.48	□□□□□ -1.37
LMO7-223	ENST00000533299	NUCKS1	Q9H1E3	243 aa	Known RBP	6.48	□□□□□ -1.37
LMO7-223	ENST00000533299	SPATA31C1	P0DKV0	1188 aa		6.47	□□□□□ -1.37
LMO7-223	ENST00000533299	SEPT12	Q8IYM1	358 aa		6.47	□□□□□ -1.37
LMO7-223	ENST00000533299	CCDC82	Q8N4S0	544 aa		6.47	□□□□□ -1.37
LMO7-223	ENST00000533299	CEP126	Q9P2H0	1117 aa		6.47	□□□□□ -1.37
LMO7-223	ENST00000533299	GPC1	P35052	558 aa		6.46	□□□□□ -1.37
LMO7-223	ENST00000533299	NFATC2IP	Q8NCF5	419 aa		6.46	□□□□□ -1.37
LMO7-223	ENST00000533299	RNF135	Q8IUD6	432 aa		6.46	□□□□□ -1.38
LMO7-223	ENST00000533299	KRTAP4-11	Q9BYQ6	195 aa		6.46	□□□□□ -1.38
LMO7-223	ENST00000533299	LZTS3	O60299	673 aa	Predicted RBP	6.45	□□□□□ -1.38
LMO7-223	ENST00000533299	ADAMTS19	Q8TE59	1207 aa		6.45	□□□□□ -1.38
LMO7-223	ENST00000533299	GAS2L1	Q99501	681 aa	Predicted RBP	6.45	□□□□□ -1.38
LMO7-223	ENST00000533299	ARID3A	Q99856	593 aa		6.45	□□□□□ -1.38
LMO7-223	ENST00000533299	MAP7D1	Q3KQU3	841 aa		6.44	□□□□□ -1.38
LMO7-223	ENST00000533299	INTS6L	Q5JSJ4	861 aa	Known RBP	6.44	□□□□□ -1.38
LMO7-223	ENST00000533299	KDF1	Q8NAX2	398 aa	Predicted RBP	6.44	□□□□□ -1.38
LMO7-223	ENST00000533299	C1orf115	Q9H7X2	142 aa		6.44	□□□□□ -1.38
LMO7-223	ENST00000533299	PPP1R12C	Q9BZL4	782 aa		6.43	□□□□□ -1.38
LMO7-223	ENST00000533299	ESF1	Q9H501	851 aa	Known RBP	6.43	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms