RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 THUMPD2Q9BTF0 503 aaKnown RBP14.74□□□□□ -0.05
GMDS-210ENST00000533279 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
GMDS-210ENST00000533279 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
GMDS-210ENST00000533279 DOT1LQ8TEK3 1739 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
GMDS-210ENST00000533279 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 ACSBG1Q96GR2 724 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 MRC1P22897 1456 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
GMDS-210ENST00000533279 CENPBP07199 599 aaPredicted RBP14.72□□□□□ -0.05
GMDS-210ENST00000533279 PRIM1P49642 420 aaKnown RBP14.72□□□□□ -0.05
GMDS-210ENST00000533279 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
GMDS-210ENST00000533279 SMARCC1Q92922 1105 aaPredicted RBP14.72□□□□□ -0.05
GMDS-210ENST00000533279 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.05
GMDS-210ENST00000533279 BRWD3Q6RI45 1802 aa14.71□□□□□ -0.05
GMDS-210ENST00000533279 ZNF521Q96K83 1311 aa14.71□□□□□ -0.05
GMDS-210ENST00000533279 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
GMDS-210ENST00000533279 BCL11BQ9C0K0 894 aaPredicted RBP14.7□□□□□ -0.06
GMDS-210ENST00000533279 NHSQ6T4R5 1651 aa14.69□□□□□ -0.06
GMDS-210ENST00000533279 CHL1O00533 1208 aa14.69□□□□□ -0.06
GMDS-210ENST00000533279 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
GMDS-210ENST00000533279 FMNL2Q96PY5 1086 aa14.69□□□□□ -0.06
GMDS-210ENST00000533279 FANCIQ9NVI1 1328 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 SLFN5Q08AF3 891 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 ZNF790Q6PG37 636 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 PIGBQ92521 554 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 MBIPQ9NS73 344 aa14.68□□□□□ -0.06
GMDS-210ENST00000533279 SOS1Q07889 1333 aaPredicted RBP14.67□□□□□ -0.06
GMDS-210ENST00000533279 TOGARAM1Q9Y4F4 1720 aa14.67□□□□□ -0.06
GMDS-210ENST00000533279 TRIM37O94972 964 aa14.67□□□□□ -0.06
GMDS-210ENST00000533279 TSR2Q969E8 191 aaKnown RBP14.67□□□□□ -0.06
GMDS-210ENST00000533279 CT47B1P0C2W7 299 aaPredicted RBP14.66□□□□□ -0.06
GMDS-210ENST00000533279 ZNF853P0CG23 659 aa14.66□□□□□ -0.06
GMDS-210ENST00000533279 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
GMDS-210ENST00000533279 ITGB4P16144 1822 aa14.66□□□□□ -0.06
GMDS-210ENST00000533279 SIPA1L3O60292 1781 aaPredicted RBP14.65□□□□□ -0.06
GMDS-210ENST00000533279 PALLDQ8WX93 1383 aa14.65□□□□□ -0.06
GMDS-210ENST00000533279 HOXB7P09629 217 aa14.65□□□□□ -0.06
GMDS-210ENST00000533279 TEX13AQ9BXU3 409 aaPredicted RBP14.65□□□□□ -0.06
GMDS-210ENST00000533279 MIS18AQ9NYP9 233 aa14.65□□□□□ -0.06
GMDS-210ENST00000533279 KCNQ2O43526 872 aa14.64□□□□□ -0.07
GMDS-210ENST00000533279 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
GMDS-210ENST00000533279 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
GMDS-210ENST00000533279 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
GMDS-210ENST00000533279 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
GMDS-210ENST00000533279 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
GMDS-210ENST00000533279 BAG6P46379 1132 aa14.63□□□□□ -0.07
GMDS-210ENST00000533279 CCDC125Q86Z20 511 aa14.63□□□□□ -0.07
GMDS-210ENST00000533279 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
GMDS-210ENST00000533279 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
GMDS-210ENST00000533279 KDM3BQ7LBC6 1761 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 STARD3NLO95772 234 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 APBA3O96018 575 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 EIF4A1P60842 406 aaKnown RBP14.62□□□□□ -0.07
GMDS-210ENST00000533279 EXOSC9Q06265 439 aaKnown RBP14.62□□□□□ -0.07
GMDS-210ENST00000533279 TWISTNBQ3B726 338 aaPredicted RBP14.62□□□□□ -0.07
GMDS-210ENST00000533279 DUSP27Q5VZP5 1158 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 STK31Q9BXU1 1019 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 ATG3Q9NT62 314 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 ASAP1Q9ULH1 1129 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 BTAF1O14981 1849 aa14.62□□□□□ -0.07
GMDS-210ENST00000533279 HEG1Q9ULI3 1381 aa14.61□□□□□ -0.07
GMDS-210ENST00000533279 PAPPAQ13219 1627 aa14.61□□□□□ -0.07
GMDS-210ENST00000533279 LOC102724428A0A0B4J2F2 783 aa14.6□□□□□ -0.07
GMDS-210ENST00000533279 SIK1P57059 783 aa14.6□□□□□ -0.07
GMDS-210ENST00000533279 SLC27A3Q5K4L6 730 aa14.6□□□□□ -0.07
GMDS-210ENST00000533279 HDGFL1Q5TGJ6 251 aa14.6□□□□□ -0.07
GMDS-210ENST00000533279 CCDC30Q5VVM6 783 aa14.6□□□□□ -0.07
GMDS-210ENST00000533279 ZNF496Q96IT1 587 aaPredicted RBP14.6□□□□□ -0.07
GMDS-210ENST00000533279 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
GMDS-210ENST00000533279 CCNL1Q9UK58 526 aaPredicted RBP14.6□□□□□ -0.07
GMDS-210ENST00000533279 ELL2O00472 640 aaPredicted RBP14.59□□□□□ -0.07
GMDS-210ENST00000533279 ATP6V1AP38606 617 aa14.59□□□□□ -0.07
GMDS-210ENST00000533279 TRMT2AQ8IZ69 625 aaKnown RBP14.59□□□□□ -0.07
GMDS-210ENST00000533279 KCNQ3O43525 872 aa14.58□□□□□ -0.08
GMDS-210ENST00000533279 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
GMDS-210ENST00000533279 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
GMDS-210ENST00000533279 PLSCR1O15162 318 aa14.57□□□□□ -0.08
GMDS-210ENST00000533279 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
GMDS-210ENST00000533279 EIF2S2P20042 333 aaKnown RBP14.57□□□□□ -0.08
GMDS-210ENST00000533279 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
GMDS-210ENST00000533279 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
GMDS-210ENST00000533279 C8orf58Q8NAV2 365 aa14.57□□□□□ -0.08
GMDS-210ENST00000533279 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
GMDS-210ENST00000533279 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
GMDS-210ENST00000533279 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
GMDS-210ENST00000533279 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
GMDS-210ENST00000533279 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
GMDS-210ENST00000533279 LAMB4A4D0S4 1761 aa14.55□□□□□ -0.08
GMDS-210ENST00000533279 NECTIN2Q92692 538 aa14.54□□□□□ -0.08
GMDS-210ENST00000533279 AK7Q96M32 723 aa14.54□□□□□ -0.08
GMDS-210ENST00000533279 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
GMDS-210ENST00000533279 TNS1Q9HBL0 1735 aaKnown RBP14.54□□□□□ -0.08
GMDS-210ENST00000533279 RGPD3A6NKT7 1758 aaPredicted RBP14.54□□□□□ -0.08
GMDS-210ENST00000533279 RGPD4Q7Z3J3 1758 aa14.54□□□□□ -0.08
GMDS-210ENST00000533279 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
GMDS-210ENST00000533279 VAMP4O75379 141 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms