RNA–Protein interactions for RNA: ENST00000533270.1

COMMD5-206, Transcript of COMM domain containing 5, humanhuman

TSL 3

Gene COMMD5, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-206ENST00000533270 LGR6Q9HBX8 967 aa29.69■■■□□ 2.34
COMMD5-206ENST00000533270 SPON1Q9HCB6 807 aa29.69■■■□□ 2.34
COMMD5-206ENST00000533270 RNMTO43148 476 aaKnown RBP29.68■■■□□ 2.34
COMMD5-206ENST00000533270 NFATC2IPQ8NCF5 419 aa29.67■■■□□ 2.34
COMMD5-206ENST00000533270 PHACTR3Q96KR7 559 aa29.67■■■□□ 2.34
COMMD5-206ENST00000533270 ZBTB7AO95365 584 aa29.66■■■□□ 2.34
COMMD5-206ENST00000533270 GAS2L2Q8NHY3 880 aa29.66■■■□□ 2.34
COMMD5-206ENST00000533270 TFCP2L1Q9NZI6 479 aa29.66■■■□□ 2.34
COMMD5-206ENST00000533270 MAP3K5Q99683 1374 aa29.65■■■□□ 2.34
COMMD5-206ENST00000533270 FCHSD2O94868 740 aa29.65■■■□□ 2.34
COMMD5-206ENST00000533270 SLC52A2Q9HAB3 445 aa29.65■■■□□ 2.34
COMMD5-206ENST00000533270 UBR3Q6ZT12 1888 aa29.65■■■□□ 2.34
COMMD5-206ENST00000533270 ITPK1Q13572 414 aa29.64■■■□□ 2.34
COMMD5-206ENST00000533270 MYBBP1AQ9BQG0 1328 aaKnown RBP29.64■■■□□ 2.34
COMMD5-206ENST00000533270 COL5A3P25940 1745 aaPredicted RBP29.63■■■□□ 2.33
COMMD5-206ENST00000533270 SLC4A9Q96Q91 983 aa29.63■■■□□ 2.33
COMMD5-206ENST00000533270 COL24A1Q17RW2 1714 aa29.62■■■□□ 2.33
COMMD5-206ENST00000533270 HMGB2P26583 209 aaKnown RBP29.62■■■□□ 2.33
COMMD5-206ENST00000533270 LINC00116Q8NCU8 138 aa29.62■■■□□ 2.33
COMMD5-206ENST00000533270 MTFR1LQ9H019 292 aa29.62■■■□□ 2.33
COMMD5-206ENST00000533270 CICQ96RK0 1608 aaPredicted RBP29.61■■■□□ 2.33
COMMD5-206ENST00000533270 ATP6V1AP38606 617 aa29.61■■■□□ 2.33
COMMD5-206ENST00000533270 PTGER2P43116 358 aa29.61■■■□□ 2.33
COMMD5-206ENST00000533270 SIPA1L3O60292 1781 aaPredicted RBP29.61■■■□□ 2.33
COMMD5-206ENST00000533270 GNAT3A8MTJ3 354 aa29.6■■■□□ 2.33
COMMD5-206ENST00000533270 ATF5Q9Y2D1 282 aaPredicted RBP29.6■■■□□ 2.33
COMMD5-206ENST00000533270 RBM42Q9BTD8 480 aaKnown RBP29.59■■■□□ 2.33
COMMD5-206ENST00000533270 ZNF316A6NFI3 1004 aaPredicted RBP29.58■■■□□ 2.33
COMMD5-206ENST00000533270 TJP1Q07157 1748 aa29.58■■■□□ 2.33
COMMD5-206ENST00000533270 IL17REQ8NFR9 667 aa29.58■■■□□ 2.33
COMMD5-206ENST00000533270 SGIP1Q9BQI5 828 aa29.58■■■□□ 2.33
COMMD5-206ENST00000533270 PRKRIP1Q9H875 184 aaPredicted RBP29.58■■■□□ 2.33
COMMD5-206ENST00000533270 AMIGO3Q86WK7 504 aa29.57■■■□□ 2.32
COMMD5-206ENST00000533270 COL23A1Q86Y22 540 aaPredicted RBP29.57■■■□□ 2.32
COMMD5-206ENST00000533270 SLC16A10Q8TF71 515 aa29.57■■■□□ 2.32
COMMD5-206ENST00000533270 CEMIPQ8WUJ3 1361 aa29.56■■■□□ 2.32
COMMD5-206ENST00000533270 AK7Q96M32 723 aa29.56■■■□□ 2.32
COMMD5-206ENST00000533270 UBR2Q8IWV8 1755 aa29.56■■■□□ 2.32
COMMD5-206ENST00000533270 DLG5Q8TDM6 1919 aa29.55■■■□□ 2.32
COMMD5-206ENST00000533270 KCPQ6ZWJ8 1503 aa29.55■■■□□ 2.32
COMMD5-206ENST00000533270 MYH14Q7Z406 1995 aaKnown RBP29.54■■■□□ 2.32
COMMD5-206ENST00000533270 PTCD1O75127 700 aaKnown RBP29.54■■■□□ 2.32
COMMD5-206ENST00000533270 PLEKHF1Q96S99 279 aa29.54■■■□□ 2.32
COMMD5-206ENST00000533270 SLC39A6Q13433 755 aa29.53■■■□□ 2.32
COMMD5-206ENST00000533270 SMIM5Q71RC9 77 aa29.51■■■□□ 2.31
COMMD5-206ENST00000533270 FLAD1Q8NFF5 587 aa29.51■■■□□ 2.31
COMMD5-206ENST00000533270 PPP1R1BQ9UD71 204 aaPredicted RBP29.51■■■□□ 2.31
COMMD5-206ENST00000533270 TEFQ10587 303 aa29.49■■■□□ 2.31
COMMD5-206ENST00000533270 CNTNAP4Q9C0A0 1308 aa29.48■■■□□ 2.31
COMMD5-206ENST00000533270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.48■■■□□ 2.31
COMMD5-206ENST00000533270 GNPATO15228 680 aa29.48■■■□□ 2.31
COMMD5-206ENST00000533270 SSFA2P28290 1259 aa29.48■■■□□ 2.31
COMMD5-206ENST00000533270 MSH5O43196 834 aa29.47■■■□□ 2.31
COMMD5-206ENST00000533270 PHF14O94880 888 aa29.47■■■□□ 2.31
COMMD5-206ENST00000533270 RC3H1Q5TC82 1133 aaKnown RBP29.46■■■□□ 2.31
COMMD5-206ENST00000533270 MCM10Q7L590 875 aa29.45■■■□□ 2.31
COMMD5-206ENST00000533270 HTATSF1O43719 755 aaKnown RBP29.44■■■□□ 2.3
COMMD5-206ENST00000533270 NEFMP07197 916 aa29.44■■■□□ 2.3
COMMD5-206ENST00000533270 RTF1Q92541 710 aaKnown RBP29.44■■■□□ 2.3
COMMD5-206ENST00000533270 DCTN1Q14203 1278 aa29.43■■■□□ 2.3
COMMD5-206ENST00000533270 PNNQ9H307 717 aaKnown RBP29.43■■■□□ 2.3
COMMD5-206ENST00000533270 CRKLP46109 303 aaKnown RBP29.42■■■□□ 2.3
COMMD5-206ENST00000533270 DNAJC10Q8IXB1 793 aa29.42■■■□□ 2.3
COMMD5-206ENST00000533270 ARXQ96QS3 562 aa29.42■■■□□ 2.3
COMMD5-206ENST00000533270 C4AP0C0L4 1744 aa29.42■■■□□ 2.3
COMMD5-206ENST00000533270 NFE2L2Q16236 605 aa29.41■■■□□ 2.3
COMMD5-206ENST00000533270 MSL1Q68DK7 614 aa29.41■■■□□ 2.3
COMMD5-206ENST00000533270 ZNF790Q6PG37 636 aa29.41■■■□□ 2.3
COMMD5-206ENST00000533270 RTCBQ9Y3I0 505 aaKnown RBP29.41■■■□□ 2.3
COMMD5-206ENST00000533270 RPS6KA4O75676 772 aa29.4■■■□□ 2.3
COMMD5-206ENST00000533270 TTC5Q8N0Z6 440 aa29.4■■■□□ 2.3
COMMD5-206ENST00000533270 MAPK8IP3Q9UPT6 1336 aa29.4■■■□□ 2.3
COMMD5-206ENST00000533270 POLD1P28340 1107 aa29.39■■■□□ 2.3
COMMD5-206ENST00000533270 VSIG10Q8N0Z9 540 aa29.39■■■□□ 2.3
COMMD5-206ENST00000533270 ZNF496Q96IT1 587 aaPredicted RBP29.38■■■□□ 2.29
COMMD5-206ENST00000533270 FHDC1Q9C0D6 1143 aaPredicted RBP29.38■■■□□ 2.29
COMMD5-206ENST00000533270 BTBD11A6QL63 1104 aa29.37■■■□□ 2.29
COMMD5-206ENST00000533270 CYP19A1P11511 503 aaPredicted RBP29.37■■■□□ 2.29
COMMD5-206ENST00000533270 INTS5Q6P9B9 1019 aaKnown RBP29.37■■■□□ 2.29
COMMD5-206ENST00000533270 KCNQ3O43525 872 aa29.36■■■□□ 2.29
COMMD5-206ENST00000533270 ADRA2BP18089 450 aa29.36■■■□□ 2.29
COMMD5-206ENST00000533270 HEG1Q9ULI3 1381 aa29.36■■■□□ 2.29
COMMD5-206ENST00000533270 TRAPPC3LQ5T215 181 aa29.35■■■□□ 2.29
COMMD5-206ENST00000533270 ARHGEF1Q92888 912 aaKnown RBP29.35■■■□□ 2.29
COMMD5-206ENST00000533270 WDR43Q15061 677 aaKnown RBP eCLIP29.34■■■□□ 2.29
COMMD5-206ENST00000533270 SYT17Q9BSW7 474 aa29.34■■■□□ 2.29
COMMD5-206ENST00000533270 CCDC87Q9NVE4 849 aa29.34■■■□□ 2.29
COMMD5-206ENST00000533270 ADAMTS8Q9UP79 889 aa29.33■■■□□ 2.29
COMMD5-206ENST00000533270 KDM3BQ7LBC6 1761 aa29.33■■■□□ 2.29
COMMD5-206ENST00000533270 CCDC146Q8IYE0 955 aa29.31■■■□□ 2.28
COMMD5-206ENST00000533270 FMNL2Q96PY5 1086 aa29.31■■■□□ 2.28
COMMD5-206ENST00000533270 TMPOP42166 694 aaKnown RBP29.3■■■□□ 2.28
COMMD5-206ENST00000533270 TAF7Q15545 349 aaPredicted RBP29.3■■■□□ 2.28
COMMD5-206ENST00000533270 THUMPD2Q9BTF0 503 aaKnown RBP29.3■■■□□ 2.28
COMMD5-206ENST00000533270 ZBTB1Q9Y2K1 713 aa29.3■■■□□ 2.28
COMMD5-206ENST00000533270 SOS1Q07889 1333 aaPredicted RBP29.29■■■□□ 2.28
COMMD5-206ENST00000533270 CCDC184Q52MB2 194 aa29.28■■■□□ 2.28
COMMD5-206ENST00000533270 RUNDC1Q96C34 613 aa29.28■■■□□ 2.28
COMMD5-206ENST00000533270 RFC4P35249 363 aa29.27■■■□□ 2.28
COMMD5-206ENST00000533270 RIPK4P57078 832 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms