RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ARHGAP31Q2M1Z3 1444 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 MSH6P52701 1360 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 FBLN1P23142 703 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
BDNF-216ENST00000532997 PDCP20941 246 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 FGD1P98174 961 aa11.29□□□□□ -0.6
BDNF-216ENST00000532997 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
BDNF-216ENST00000532997 EPB41L2O43491 1005 aaKnown RBP11.29□□□□□ -0.6
BDNF-216ENST00000532997 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 MROH1Q8NDA8 1641 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 NEO1Q92859 1461 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 RNF20Q5VTR2 975 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
BDNF-216ENST00000532997 CHL1O00533 1208 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 FIBPO43427 364 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 CCDC192P0DO97 292 aa11.28□□□□□ -0.6
BDNF-216ENST00000532997 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
BDNF-216ENST00000532997 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
BDNF-216ENST00000532997 RTL1A6NKG5 1358 aa11.27□□□□□ -0.6
BDNF-216ENST00000532997 SSH2Q76I76 1423 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.61
BDNF-216ENST00000532997 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
BDNF-216ENST00000532997 KIF3AQ9Y496 699 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 HIP1O00291 1037 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 BRD1O95696 1058 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
BDNF-216ENST00000532997 PSMA5P28066 241 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 UBE2HP62256 183 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 ARHGEF28Q8N1W1 1705 aaKnown RBP11.27□□□□□ -0.61
BDNF-216ENST00000532997 CLASRPQ8N2M8 674 aaKnown RBP11.27□□□□□ -0.61
BDNF-216ENST00000532997 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
BDNF-216ENST00000532997 CAMSAP1Q5T5Y3 1602 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 F6X3S4 739 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
BDNF-216ENST00000532997 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 AOX1Q06278 1338 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 FLIIQ13045 1269 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
BDNF-216ENST00000532997 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
BDNF-216ENST00000532997 EID1Q9Y6B2 187 aa11.26□□□□□ -0.61
BDNF-216ENST00000532997 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
BDNF-216ENST00000532997 KRT85P78386 507 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
BDNF-216ENST00000532997 CHMLP26374 656 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 GPT2Q8TD30 523 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
BDNF-216ENST00000532997 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 STX6O43752 255 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 ADCY5O95622 1261 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
BDNF-216ENST00000532997 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
BDNF-216ENST00000532997 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
BDNF-216ENST00000532997 ANKRD1Q15327 319 aa11.24□□□□□ -0.61
BDNF-216ENST00000532997 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
BDNF-216ENST00000532997 PKP1Q13835 747 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 EIF2S2P20042 333 aaKnown RBP11.23□□□□□ -0.61
BDNF-216ENST00000532997 TEFQ10587 303 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 MIS18AQ9NYP9 233 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
BDNF-216ENST00000532997 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 CUL4AQ13619 759 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
BDNF-216ENST00000532997 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
BDNF-216ENST00000532997 PTPRMP28827 1452 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 H3BQV1 296 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 IFFO2Q5TF58 517 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 HSP90B1P14625 803 aaKnown RBP11.22□□□□□ -0.61
BDNF-216ENST00000532997 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
BDNF-216ENST00000532997 NUP62CLQ9H1M0 184 aa11.22□□□□□ -0.61
BDNF-216ENST00000532997 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
BDNF-216ENST00000532997 G3BP1Q13283 466 aaKnown RBP eCLIP11.21□□□□□ -0.61
BDNF-216ENST00000532997 MAP3K11Q16584 847 aa11.21□□□□□ -0.61
BDNF-216ENST00000532997 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
BDNF-216ENST00000532997 TPM4P67936 248 aa11.21□□□□□ -0.61
BDNF-216ENST00000532997 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
BDNF-216ENST00000532997 JAKMIP1Q96N16 626 aaKnown RBP11.21□□□□□ -0.61
BDNF-216ENST00000532997 KIF20BQ96Q89 1820 aa11.21□□□□□ -0.62
BDNF-216ENST00000532997 RGS12O14924 1447 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms