RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
SDHD-213ENST00000532699 CICQ96RK0 1608 aaPredicted RBP17.2■□□□□ 0.34
SDHD-213ENST00000532699 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SDHD-213ENST00000532699 POLD1P28340 1107 aa17.18■□□□□ 0.34
SDHD-213ENST00000532699 MSH5O43196 834 aa17.17■□□□□ 0.34
SDHD-213ENST00000532699 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
SDHD-213ENST00000532699 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
SDHD-213ENST00000532699 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
SDHD-213ENST00000532699 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
SDHD-213ENST00000532699 BRCA1P38398 1863 aaKnown RBP17.16■□□□□ 0.34
SDHD-213ENST00000532699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
SDHD-213ENST00000532699 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
SDHD-213ENST00000532699 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.341e-8■■□□□ 11.7
SDHD-213ENST00000532699 ZNF784Q8NCA9 323 aaPredicted RBP17.16■□□□□ 0.34
SDHD-213ENST00000532699 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
SDHD-213ENST00000532699 PHF14O94880 888 aa17.15■□□□□ 0.34
SDHD-213ENST00000532699 SULT6B1Q6IMI4 303 aa17.15■□□□□ 0.34
SDHD-213ENST00000532699 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
SDHD-213ENST00000532699 AK7Q96M32 723 aa17.15■□□□□ 0.34
SDHD-213ENST00000532699 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
SDHD-213ENST00000532699 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.33
SDHD-213ENST00000532699 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
SDHD-213ENST00000532699 MTHFSP49914 203 aa17.13■□□□□ 0.33
SDHD-213ENST00000532699 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
SDHD-213ENST00000532699 DCAF5Q96JK2 942 aa17.13■□□□□ 0.33
SDHD-213ENST00000532699 SSFA2P28290 1259 aa17.12■□□□□ 0.33
SDHD-213ENST00000532699 GPR162Q16538 588 aa17.12■□□□□ 0.33
SDHD-213ENST00000532699 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
SDHD-213ENST00000532699 MRC1P22897 1456 aa17.12■□□□□ 0.33
SDHD-213ENST00000532699 GNPATO15228 680 aa17.11■□□□□ 0.33
SDHD-213ENST00000532699 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
SDHD-213ENST00000532699 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
SDHD-213ENST00000532699 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
SDHD-213ENST00000532699 AFDNP55196 1824 aaKnown RBP17.08■□□□□ 0.33
SDHD-213ENST00000532699 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
SDHD-213ENST00000532699 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
SDHD-213ENST00000532699 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
SDHD-213ENST00000532699 HMOX1P09601 288 aa17.08■□□□□ 0.32
SDHD-213ENST00000532699 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
SDHD-213ENST00000532699 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
SDHD-213ENST00000532699 LGR6Q9HBX8 967 aa17.08■□□□□ 0.32
SDHD-213ENST00000532699 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
SDHD-213ENST00000532699 CABP4P57796 275 aa17.07■□□□□ 0.32
SDHD-213ENST00000532699 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
SDHD-213ENST00000532699 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
SDHD-213ENST00000532699 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
SDHD-213ENST00000532699 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
SDHD-213ENST00000532699 CEP350Q5VT06 3117 aa17.04■□□□□ 0.32
SDHD-213ENST00000532699 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
SDHD-213ENST00000532699 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
SDHD-213ENST00000532699 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
SDHD-213ENST00000532699 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
SDHD-213ENST00000532699 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SDHD-213ENST00000532699 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
SDHD-213ENST00000532699 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
SDHD-213ENST00000532699 GYS1P13807 737 aa17.03■□□□□ 0.32
SDHD-213ENST00000532699 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
SDHD-213ENST00000532699 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
SDHD-213ENST00000532699 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
SDHD-213ENST00000532699 MMP10P09238 476 aa17.02■□□□□ 0.32
SDHD-213ENST00000532699 INTS5Q6P9B9 1019 aaKnown RBP17.02■□□□□ 0.32
SDHD-213ENST00000532699 SLC52A2Q9HAB3 445 aa17.02■□□□□ 0.32
SDHD-213ENST00000532699 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.32
SDHD-213ENST00000532699 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
SDHD-213ENST00000532699 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.31
SDHD-213ENST00000532699 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
SDHD-213ENST00000532699 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
SDHD-213ENST00000532699 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
SDHD-213ENST00000532699 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
SDHD-213ENST00000532699 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
SDHD-213ENST00000532699 SBF1O95248 1867 aa17■□□□□ 0.31
SDHD-213ENST00000532699 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
SDHD-213ENST00000532699 ADCY9O60503 1353 aa17■□□□□ 0.31
SDHD-213ENST00000532699 ADRA2BP18089 450 aa16.99■□□□□ 0.31
SDHD-213ENST00000532699 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
SDHD-213ENST00000532699 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
SDHD-213ENST00000532699 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
SDHD-213ENST00000532699 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SDHD-213ENST00000532699 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
SDHD-213ENST00000532699 ATP10DQ9P241 1426 aa16.96■□□□□ 0.31
SDHD-213ENST00000532699 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
SDHD-213ENST00000532699 DDR1Q08345 913 aa16.96■□□□□ 0.31
SDHD-213ENST00000532699 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
SDHD-213ENST00000532699 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
SDHD-213ENST00000532699 CCDC88AQ3V6T2 1871 aa16.95■□□□□ 0.3
SDHD-213ENST00000532699 KCNA3P22001 575 aa16.95■□□□□ 0.3
SDHD-213ENST00000532699 RFC4P35249 363 aa16.95■□□□□ 0.3
SDHD-213ENST00000532699 NLGN1Q8N2Q7 840 aa16.95■□□□□ 0.3
SDHD-213ENST00000532699 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
SDHD-213ENST00000532699 SOS1Q07889 1333 aaPredicted RBP16.95■□□□□ 0.3
SDHD-213ENST00000532699 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
SDHD-213ENST00000532699 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
SDHD-213ENST00000532699 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
SDHD-213ENST00000532699 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
SDHD-213ENST00000532699 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
SDHD-213ENST00000532699 BCL2L12Q9HB09 334 aa16.93■□□□□ 0.3
SDHD-213ENST00000532699 ZBTB1Q9Y2K1 713 aa16.93■□□□□ 0.3
SDHD-213ENST00000532699 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
SDHD-213ENST00000532699 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
SDHD-213ENST00000532699 DPEP1P16444 411 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms