RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
NUP98-219ENST00000532475 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
NUP98-219ENST00000532475 TOMM70O94826 608 aa11.68□□□□□ -0.54
NUP98-219ENST00000532475 GSE1Q14687 1217 aa11.68□□□□□ -0.54
NUP98-219ENST00000532475 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
NUP98-219ENST00000532475 LY75O60449 1722 aa11.68□□□□□ -0.54
NUP98-219ENST00000532475 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 LTN1O94822 1766 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 STK25O00506 426 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 CAPN15O75808 1086 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
NUP98-219ENST00000532475 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
NUP98-219ENST00000532475 CYP27B1O15528 508 aa11.66□□□□□ -0.54
NUP98-219ENST00000532475 COG3Q96JB2 828 aa11.66□□□□□ -0.54
NUP98-219ENST00000532475 AK7Q96M32 723 aa11.66□□□□□ -0.54
NUP98-219ENST00000532475 EDC4Q6P2E9 1401 aaKnown RBP11.66□□□□□ -0.54
NUP98-219ENST00000532475 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
NUP98-219ENST00000532475 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
NUP98-219ENST00000532475 RAPGEF4Q8WZA2 1011 aa11.65□□□□□ -0.54
NUP98-219ENST00000532475 PIGBQ92521 554 aa11.65□□□□□ -0.54
NUP98-219ENST00000532475 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
NUP98-219ENST00000532475 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
NUP98-219ENST00000532475 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
NUP98-219ENST00000532475 LINC00116Q8NCU8 138 aa11.64□□□□□ -0.55
NUP98-219ENST00000532475 CARD11Q9BXL7 1154 aa11.64□□□□□ -0.55
NUP98-219ENST00000532475 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
NUP98-219ENST00000532475 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
NUP98-219ENST00000532475 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
NUP98-219ENST00000532475 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 MMP10P09238 476 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 ITPK1Q13572 414 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 GGNBP2Q9H3C7 697 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 FAM208AQ9UK61 1670 aaKnown RBP11.62□□□□□ -0.55
NUP98-219ENST00000532475 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
NUP98-219ENST00000532475 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 FYB1O15117 783 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 SSFA2P28290 1259 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 SIK1P57059 783 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 SMARCC1Q92922 1105 aaPredicted RBP11.61□□□□□ -0.55
NUP98-219ENST00000532475 KLRG1Q96E93 195 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
NUP98-219ENST00000532475 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
NUP98-219ENST00000532475 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
NUP98-219ENST00000532475 GNPATO15228 680 aa11.6□□□□□ -0.55
NUP98-219ENST00000532475 DPEP1P16444 411 aa11.6□□□□□ -0.55
NUP98-219ENST00000532475 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
NUP98-219ENST00000532475 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
NUP98-219ENST00000532475 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
NUP98-219ENST00000532475 TGFB2P61812 414 aa11.59□□□□□ -0.55
NUP98-219ENST00000532475 C9orf131Q5VYM1 1079 aa11.59□□□□□ -0.55
NUP98-219ENST00000532475 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
NUP98-219ENST00000532475 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
NUP98-219ENST00000532475 TESK2Q96S53 571 aa11.59□□□□□ -0.55
NUP98-219ENST00000532475 C5P01031 1676 aa11.59□□□□□ -0.55
NUP98-219ENST00000532475 FCHSD2O94868 740 aa11.58□□□□□ -0.56
NUP98-219ENST00000532475 KCNA3P22001 575 aa11.58□□□□□ -0.56
NUP98-219ENST00000532475 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
NUP98-219ENST00000532475 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
NUP98-219ENST00000532475 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
NUP98-219ENST00000532475 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
NUP98-219ENST00000532475 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
NUP98-219ENST00000532475 TRAPPC3LQ5T215 181 aa11.57□□□□□ -0.56
NUP98-219ENST00000532475 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
NUP98-219ENST00000532475 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
NUP98-219ENST00000532475 SLC24A3Q9HC58 644 aa11.57□□□□□ -0.56
NUP98-219ENST00000532475 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
NUP98-219ENST00000532475 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
NUP98-219ENST00000532475 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 ST20-MTHFSA0A0A6YYL1 179 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 PRELPP51888 382 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 TMF1P82094 1093 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
NUP98-219ENST00000532475 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 ATG3Q9NT62 314 aa11.56□□□□□ -0.56
NUP98-219ENST00000532475 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
NUP98-219ENST00000532475 UBR3Q6ZT12 1888 aa11.55□□□□□ -0.56
NUP98-219ENST00000532475 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 INSRP06213 1382 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 GYS1P13807 737 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 FSTL1Q12841 308 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
NUP98-219ENST00000532475 EMILIN1Q9Y6C2 1016 aa11.54□□□□□ -0.56
NUP98-219ENST00000532475 NSD3Q9BZ95 1437 aa11.53□□□□□ -0.56
NUP98-219ENST00000532475 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
NUP98-219ENST00000532475 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
NUP98-219ENST00000532475 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
NUP98-219ENST00000532475 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 EYA1Q99502 592 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.57
NUP98-219ENST00000532475 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 PIM2Q9P1W9 311 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms