RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 HMOX1P09601 288 aa12.18□□□□□ -0.46
NECTIN1-207ENST00000532197 DDX10Q13206 875 aaKnown RBP12.18□□□□□ -0.46
NECTIN1-207ENST00000532197 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
NECTIN1-207ENST00000532197 C4BP0C0L5 1744 aa12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 MRC1P22897 1456 aa12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
NECTIN1-207ENST00000532197 FCHSD2O94868 740 aa12.16□□□□□ -0.46
NECTIN1-207ENST00000532197 POLD1P28340 1107 aa12.16□□□□□ -0.46
NECTIN1-207ENST00000532197 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
NECTIN1-207ENST00000532197 CABP4P57796 275 aa12.15□□□□□ -0.46
NECTIN1-207ENST00000532197 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
NECTIN1-207ENST00000532197 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
NECTIN1-207ENST00000532197 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
NECTIN1-207ENST00000532197 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
NECTIN1-207ENST00000532197 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 SIK1P57059 783 aa12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 MTHFSDQ2M296 383 aaKnown RBP12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
NECTIN1-207ENST00000532197 KCNQ4P56696 695 aa12.13□□□□□ -0.47
NECTIN1-207ENST00000532197 NFATC2IPQ8NCF5 419 aa12.13□□□□□ -0.47
NECTIN1-207ENST00000532197 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
NECTIN1-207ENST00000532197 TJP1Q07157 1748 aa12.11□□□□□ -0.47
NECTIN1-207ENST00000532197 MYH14Q7Z406 1995 aaKnown RBP12.11□□□□□ -0.47
NECTIN1-207ENST00000532197 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
NECTIN1-207ENST00000532197 NEFMP07197 916 aa12.1□□□□□ -0.47
NECTIN1-207ENST00000532197 ATP6V1AP38606 617 aa12.1□□□□□ -0.47
NECTIN1-207ENST00000532197 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
NECTIN1-207ENST00000532197 LGR6Q9HBX8 967 aa12.1□□□□□ -0.47
NECTIN1-207ENST00000532197 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 HTATSF1O43719 755 aaKnown RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 COL23A1Q86Y22 540 aaPredicted RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 AK7Q96M32 723 aa12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
NECTIN1-207ENST00000532197 SSFA2P28290 1259 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 TEFQ10587 303 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 ITPK1Q13572 414 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 GPR162Q16538 588 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 IL17REQ8NFR9 667 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
NECTIN1-207ENST00000532197 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
NECTIN1-207ENST00000532197 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
NECTIN1-207ENST00000532197 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
NECTIN1-207ENST00000532197 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
NECTIN1-207ENST00000532197 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
NECTIN1-207ENST00000532197 C4AP0C0L4 1744 aa12.06□□□□□ -0.48
NECTIN1-207ENST00000532197 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
NECTIN1-207ENST00000532197 ADRA2BP18089 450 aa12.06□□□□□ -0.48
NECTIN1-207ENST00000532197 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
NECTIN1-207ENST00000532197 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
NECTIN1-207ENST00000532197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.05□□□□□ -0.48
NECTIN1-207ENST00000532197 MSH5O43196 834 aa12.05□□□□□ -0.48
NECTIN1-207ENST00000532197 CHD4Q14839 1912 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 GNPATO15228 680 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 RPS6KA4O75676 772 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
NECTIN1-207ENST00000532197 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
NECTIN1-207ENST00000532197 NFE2L2Q16236 605 aa12.03□□□□□ -0.48
NECTIN1-207ENST00000532197 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
NECTIN1-207ENST00000532197 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
NECTIN1-207ENST00000532197 TEX13AQ9BXU3 409 aaPredicted RBP12.03□□□□□ -0.48
NECTIN1-207ENST00000532197 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
NECTIN1-207ENST00000532197 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
NECTIN1-207ENST00000532197 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
NECTIN1-207ENST00000532197 UTRNP46939 3433 aa12.02□□□□□ -0.49
NECTIN1-207ENST00000532197 BTBD11A6QL63 1104 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 STARD3NLO95772 234 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 FMNL2Q96PY5 1086 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 KIF13BQ9NQT8 1826 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
NECTIN1-207ENST00000532197 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
NECTIN1-207ENST00000532197 PHF14O94880 888 aa12□□□□□ -0.49
NECTIN1-207ENST00000532197 MSL1Q68DK7 614 aa12□□□□□ -0.49
NECTIN1-207ENST00000532197 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
NECTIN1-207ENST00000532197 MCM10Q7L590 875 aa12□□□□□ -0.49
NECTIN1-207ENST00000532197 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
NECTIN1-207ENST00000532197 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms